Gene info for Pf1N1B4_3440 in Pseudomonas fluorescens FW300-N1B4

Updated annotation (from data): Succinylornithine transaminase (EC 2.6.1.81)
Rationale: Specifically important for utilizing L-Arginine. Automated validation from mutant phenotype: the predicted function (SUCCORNTRANSAM-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: Succinylornithine transaminase (EC 2.6.1.81)
Type 1: Protein-coding gene
Located on scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 3,835,594 to 3,836,814
See nucleotide sequence around Pf1N1B4_3440 or for all of scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon

Other databases: uniprot: A0A166PB01

Nearby Genes

500 ntPf1N1B4_3435 and Pf1N1B4_3436 are separated by 188 nucleotidesPf1N1B4_3436 and Pf1N1B4_3437 overlap by 24 nucleotidesPf1N1B4_3437 and Pf1N1B4_3438 are separated by 34 nucleotidesPf1N1B4_3438 and Pf1N1B4_3439 are separated by 201 nucleotidesPf1N1B4_3439 and Pf1N1B4_3440 overlap by 15 nucleotidesPf1N1B4_3440 and Pf1N1B4_3441 are separated by 23 nucleotidesPf1N1B4_3441 and Pf1N1B4_3442 are separated by 72 nucleotidesPf1N1B4_3442 and Pf1N1B4_3443 are separated by 87 nucleotidesPf1N1B4_3443 and Pf1N1B4_3444 overlap by 1 nucleotidesPf1N1B4_3444 and Pf1N1B4_3445 are separated by 161 nucleotides Pf1N1B4_3435 - ABC transporter for L-Arginine and L-Citrulline, ATPase component (from data), at 3,828,229 to 3,828,993 _3435 Pf1N1B4_3436 - hypothetical protein, at 3,829,182 to 3,829,337 _3436 Pf1N1B4_3437 - Arginine pathway regulatory protein ArgR, repressor of arg regulon, at 3,829,314 to 3,830,219 _3437 Pf1N1B4_3438 - FIG00963434: hypothetical protein, at 3,830,254 to 3,835,287 _3438 Pf1N1B4_3439 - hypothetical protein, at 3,835,489 to 3,835,608 _3439 Pf1N1B4_3440 - Succinylornithine transaminase (EC 2.6.1.81) (from data), at 3,835,594 to 3,836,814 _3440 Pf1N1B4_3441 - hypothetical protein, at 3,836,838 to 3,836,966 _3441 Pf1N1B4_3442 - Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109), at 3,837,039 to 3,838,058 _3442 Pf1N1B4_3443 - Arginine N-succinyltransferase (EC 2.3.1.109), at 3,838,146 to 3,839,171 _3443 Pf1N1B4_3444 - Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), at 3,839,171 to 3,840,637 _3444 Pf1N1B4_3445 - Succinylarginine dihydrolase (EC 3.5.3.23), at 3,840,799 to 3,842,145 _3445
Locus Name Description Strand Phenotype
Pf1N1B4_3435 ABC transporter for L-Arginine and L-Citrulline, ATPase component (from data) + sig.
Pf1N1B4_3436 hypothetical protein - no data
Pf1N1B4_3437 Arginine pathway regulatory protein ArgR, repressor of arg regulon + strong
Pf1N1B4_3438 FIG00963434: hypothetical protein - insig.
Pf1N1B4_3439 hypothetical protein - sig.
Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) + strong
Pf1N1B4_3441 hypothetical protein - no data
Pf1N1B4_3442 Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109) + no data
Pf1N1B4_3443 Arginine N-succinyltransferase (EC 2.3.1.109) + insig.
Pf1N1B4_3444 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) + no data
Pf1N1B4_3445 Succinylarginine dihydrolase (EC 3.5.3.23) + sig.

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