Gene info for Pf1N1B4_2254 in Pseudomonas fluorescens FW300-N1B4

Updated annotation (from data): Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
Rationale: Specifically important for: Putrescine Dihydrochloride. This is the first step in putrescine catabolism. Some close homologs are annotated as this by SEED, so not sure why it was missed. Also, another gene is annotated as this activity (Pf1N1B4_4354) but has no phenotype.
Original annotation: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
Type 1: Protein-coding gene
Located on scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 2,569,579 to 2,570,859
See nucleotide sequence around Pf1N1B4_2254 or for all of scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon

Other databases: uniprot: A0A166NMU2

Nearby Genes

500 ntPf1N1B4_2249 and Pf1N1B4_2250 are separated by 9 nucleotidesPf1N1B4_2250 and Pf1N1B4_2251 overlap by 4 nucleotidesPf1N1B4_2251 and Pf1N1B4_2252 are separated by 34 nucleotidesPf1N1B4_2252 and Pf1N1B4_2253 are separated by 152 nucleotidesPf1N1B4_2253 and Pf1N1B4_2254 are separated by 227 nucleotidesPf1N1B4_2254 and Pf1N1B4_2255 are separated by 374 nucleotidesPf1N1B4_2255 and Pf1N1B4_2256 are separated by 37 nucleotidesPf1N1B4_2256 and Pf1N1B4_2257 are separated by 57 nucleotidesPf1N1B4_2257 and Pf1N1B4_2258 overlap by 4 nucleotidesPf1N1B4_2258 and Pf1N1B4_2259 are separated by 167 nucleotides Pf1N1B4_2249 - Alkanesulfonate monooxygenase (EC 1.14.14.5), at 2,565,573 to 2,566,721 _2249 Pf1N1B4_2250 - Alkanesulfonates transport system permease protein, at 2,566,731 to 2,567,513 _2250 Pf1N1B4_2251 - Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB, at 2,567,510 to 2,568,316 _2251 Pf1N1B4_2252 - Organosulfonate utilization protein SsuF, at 2,568,351 to 2,568,566 _2252 Pf1N1B4_2253 - Transcriptional regulator, TetR family, at 2,568,719 to 2,569,351 _2253 Pf1N1B4_2254 - Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data), at 2,569,579 to 2,570,859 _2254 Pf1N1B4_2255 - Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94), at 2,571,234 to 2,572,010 _2255 Pf1N1B4_2256 - glutamine synthetase family protein, at 2,572,048 to 2,573,406 _2256 Pf1N1B4_2257 - Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), at 2,573,464 to 2,574,666 _2257 Pf1N1B4_2258 - Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), at 2,574,663 to 2,574,827 _2258 Pf1N1B4_2259 - Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2), at 2,574,995 to 2,576,107 _2259
Locus Name Description Strand Phenotype
Pf1N1B4_2249 Alkanesulfonate monooxygenase (EC 1.14.14.5) + insig.
Pf1N1B4_2250 Alkanesulfonates transport system permease protein + sig.
Pf1N1B4_2251 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB + no data
Pf1N1B4_2252 Organosulfonate utilization protein SsuF + insig.
Pf1N1B4_2253 Transcriptional regulator, TetR family - sig.
Pf1N1B4_2254 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) - strong
Pf1N1B4_2255 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) + sig.
Pf1N1B4_2256 glutamine synthetase family protein + sig.
Pf1N1B4_2257 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) + insig.
Pf1N1B4_2258 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) + no data
Pf1N1B4_2259 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) + sig.

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