Gene info for Pf1N1B4_2023 in Pseudomonas fluorescens FW300-N1B4

Updated annotation (from data): L-asparaginase (EC 3.5.1.1)
Rationale: Specifically important for utilizing L-Asparagine. Automated validation from mutant phenotype: the predicted function (ASPARAGHYD-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: L-asparaginase (EC 3.5.1.1)
Type 1: Protein-coding gene
Located on scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 2,308,645 to 2,309,649
See nucleotide sequence around Pf1N1B4_2023 or for all of scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon

Other databases: uniprot: A0A162ATZ5

Nearby Genes

500 ntPf1N1B4_2018 and Pf1N1B4_2019 are separated by 15 nucleotidesPf1N1B4_2019 and Pf1N1B4_2020 are separated by 12 nucleotidesPf1N1B4_2020 and Pf1N1B4_2021 overlap by 21 nucleotidesPf1N1B4_2021 and Pf1N1B4_2022 overlap by 17 nucleotidesPf1N1B4_2022 and Pf1N1B4_2023 are separated by 173 nucleotidesPf1N1B4_2023 and Pf1N1B4_2024 are separated by 175 nucleotidesPf1N1B4_2024 and Pf1N1B4_2025 are separated by 538 nucleotidesPf1N1B4_2025 and Pf1N1B4_2026 are separated by 180 nucleotidesPf1N1B4_2026 and Pf1N1B4_2027 are separated by 334 nucleotidesPf1N1B4_2027 and Pf1N1B4_2028 are separated by 11 nucleotides Pf1N1B4_2018 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 2,303,497 to 2,305,050 _2018 Pf1N1B4_2019 - Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2), at 2,305,066 to 2,306,166 _2019 Pf1N1B4_2020 - Deacetylases, including yeast histone deacetylase and acetoin utilization protein, at 2,306,179 to 2,307,210 _2020 Pf1N1B4_2021 - hypothetical protein, at 2,307,190 to 2,307,489 _2021 Pf1N1B4_2022 - Transcriptional regulator, AraC family, at 2,307,473 to 2,308,471 _2022 Pf1N1B4_2023 - L-asparaginase (EC 3.5.1.1) (from data), at 2,308,645 to 2,309,649 _2023 Pf1N1B4_2024 - sodium/alanine transporter, at 2,309,825 to 2,311,276 _2024 Pf1N1B4_2025 - Aspartate ammonia-lyase (EC 4.3.1.1), at 2,311,815 to 2,313,239 _2025 Pf1N1B4_2026 - Transcriptional regulator, at 2,313,420 to 2,314,337 _2026 Pf1N1B4_2027 - Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21), at 2,314,672 to 2,315,163 _2027 Pf1N1B4_2028 - Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21), at 2,315,175 to 2,316,257 _2028
Locus Name Description Strand Phenotype
Pf1N1B4_2018 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) + insig.
Pf1N1B4_2019 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) - insig.
Pf1N1B4_2020 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - insig.
Pf1N1B4_2021 hypothetical protein + insig.
Pf1N1B4_2022 Transcriptional regulator, AraC family - insig.
Pf1N1B4_2023 L-asparaginase (EC 3.5.1.1) (from data) - sig.
Pf1N1B4_2024 sodium/alanine transporter - sig.
Pf1N1B4_2025 Aspartate ammonia-lyase (EC 4.3.1.1) - no data
Pf1N1B4_2026 Transcriptional regulator + strong
Pf1N1B4_2027 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) + no data
Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) + no data

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