Gene info for Pf1N1B4_1624 in Pseudomonas fluorescens FW300-N1B4

Updated annotation (from data): 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00007.
Original annotation: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)
Type 1: Protein-coding gene
Located on scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 1,868,509 to 1,869,246
See nucleotide sequence around Pf1N1B4_1624 or for all of scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon

Other databases: uniprot: A0A166NAD2

Nearby Genes

500 ntPf1N1B4_1619 and Pf1N1B4_1620 are separated by 1 nucleotidesPf1N1B4_1620 and Pf1N1B4_1621 are separated by 104 nucleotidesPf1N1B4_1621 and Pf1N1B4_1622 are separated by 3 nucleotidesPf1N1B4_1622 and Pf1N1B4_1623 are separated by 68 nucleotidesPf1N1B4_1623 and Pf1N1B4_1624 are separated by 9 nucleotidesPf1N1B4_1624 and Pf1N1B4_1625 are separated by 99 nucleotidesPf1N1B4_1625 and Pf1N1B4_1626 are separated by 0 nucleotidesPf1N1B4_1626 and Pf1N1B4_1627 overlap by 1 nucleotidesPf1N1B4_1627 and Pf1N1B4_1628 are separated by 229 nucleotidesPf1N1B4_1628 and Pf1N1B4_1629 are separated by 258 nucleotides Pf1N1B4_1619 - Carboxyl-terminal protease (EC 3.4.21.102), at 1,863,440 to 1,864,759 _1619 Pf1N1B4_1620 - Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase, at 1,864,761 to 1,865,558 _1620 Pf1N1B4_1621 - Trypsin domain protein, at 1,865,663 to 1,866,901 _1621 Pf1N1B4_1622 - ABC-type amino acid transport, signal transduction systems, periplasmic component/domain, at 1,866,905 to 1,867,660 _1622 Pf1N1B4_1623 - Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-), at 1,867,729 to 1,868,499 _1623 Pf1N1B4_1624 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data), at 1,868,509 to 1,869,246 _1624 Pf1N1B4_1625 - FIG00956267: hypothetical protein, at 1,869,346 to 1,869,603 _1625 Pf1N1B4_1626 - Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-), at 1,869,604 to 1,870,242 _1626 Pf1N1B4_1627 - Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 1,870,242 to 1,870,877 _1627 Pf1N1B4_1628 - MFS permease, at 1,871,107 to 1,872,771 _1628 Pf1N1B4_1629 - FIG00958480: hypothetical protein, at 1,873,030 to 1,873,434 _1629
Locus Name Description Strand Phenotype
Pf1N1B4_1619 Carboxyl-terminal protease (EC 3.4.21.102) + strong
Pf1N1B4_1620 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase + insig.
Pf1N1B4_1621 Trypsin domain protein + insig.
Pf1N1B4_1622 ABC-type amino acid transport, signal transduction systems, periplasmic component/domain - insig.
Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) - no data
Pf1N1B4_1624 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) - strong
Pf1N1B4_1625 FIG00956267: hypothetical protein - strong
Pf1N1B4_1626 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) - strong
Pf1N1B4_1627 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) - strong
Pf1N1B4_1628 MFS permease - sig.
Pf1N1B4_1629 FIG00958480: hypothetical protein + insig.

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