Gene info for Pf1N1B4_1109 in Pseudomonas fluorescens FW300-N1B4

Updated annotation (from data): 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Rationale: Specifically important for: D-Galacturonic Acid monohydrate. ketoglutarate semialdehyde is an intermedate in the oxidation of galacturonate (SEED_correct)
Original annotation: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Type 1: Protein-coding gene
Located on scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 1,242,992 to 1,244,437
See nucleotide sequence around Pf1N1B4_1109 or for all of scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon

Other databases: uniprot: A0A166N099

Nearby Genes

500 ntPf1N1B4_1104 and Pf1N1B4_1105 overlap by 4 nucleotidesPf1N1B4_1105 and Pf1N1B4_1106 are separated by 155 nucleotidesPf1N1B4_1106 and Pf1N1B4_1107 are separated by 167 nucleotidesPf1N1B4_1107 and Pf1N1B4_1108 are separated by 11 nucleotidesPf1N1B4_1108 and Pf1N1B4_1109 are separated by 160 nucleotidesPf1N1B4_1109 and Pf1N1B4_1110 are separated by 59 nucleotidesPf1N1B4_1110 and Pf1N1B4_1111 are separated by 235 nucleotidesPf1N1B4_1111 and Pf1N1B4_1112 are separated by 14 nucleotidesPf1N1B4_1112 and Pf1N1B4_1113 are separated by 139 nucleotidesPf1N1B4_1113 and Pf1N1B4_1114 are separated by 63 nucleotides Pf1N1B4_1104 - K+-dependent Na+/Ca+ exchanger related-protein, at 1,237,196 to 1,238,257 _1104 Pf1N1B4_1105 - 4-carboxymuconolactone decarboxylase (EC 4.1.1.44), at 1,238,254 to 1,238,634 _1105 Pf1N1B4_1106 - membrane protein, putative, at 1,238,790 to 1,239,731 _1106 Pf1N1B4_1107 - D-galactarate dehydratase (EC 4.2.1.42), at 1,239,899 to 1,241,452 _1107 Pf1N1B4_1108 - D-galactarate permease, at 1,241,464 to 1,242,831 _1108 Pf1N1B4_1109 - 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) (from data), at 1,242,992 to 1,244,437 _1109 Pf1N1B4_1110 - 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data), at 1,244,497 to 1,245,408 _1110 Pf1N1B4_1111 - Phosphatidylcholine-hydrolyzing phospholipase C (EC 3.1.4.3), at 1,245,644 to 1,246,963 _1111 Pf1N1B4_1112 - hypothetical protein, at 1,246,978 to 1,247,169 _1112 Pf1N1B4_1113 - Predicted D-glucarate or D-galactorate regulator, GntR family, at 1,247,309 to 1,248,184 _1113 Pf1N1B4_1114 - ABC transporter, ATP-binding protein, at 1,248,248 to 1,249,975 _1114
Locus Name Description Strand Phenotype
Pf1N1B4_1104 K+-dependent Na+/Ca+ exchanger related-protein + insig.
Pf1N1B4_1105 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) + insig.
Pf1N1B4_1106 membrane protein, putative - insig.
Pf1N1B4_1107 D-galactarate dehydratase (EC 4.2.1.42) - sig.
Pf1N1B4_1108 D-galactarate permease - sig.
Pf1N1B4_1109 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) (from data) - strong
Pf1N1B4_1110 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) - strong
Pf1N1B4_1111 Phosphatidylcholine-hydrolyzing phospholipase C (EC 3.1.4.3) + insig.
Pf1N1B4_1112 hypothetical protein + no data
Pf1N1B4_1113 Predicted D-glucarate or D-galactorate regulator, GntR family - strong
Pf1N1B4_1114 ABC transporter, ATP-binding protein - strong

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