Gene info for Pf1N1B4_1013 in Pseudomonas fluorescens FW300-N1B4

Updated annotation (from data): L-serine ammonia-lyase (EC 4.3.1.17)
Rationale: Specifically important for utilizing L-Serine. Automated validation from mutant phenotype: the predicted function (4.3.1.17) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: L-serine dehydratase (EC 4.3.1.17)
Type 1: Protein-coding gene
Located on scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 1,148,707 to 1,150,083
See nucleotide sequence around Pf1N1B4_1013 or for all of scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon

Other databases: uniprot: A0A166MYG9

Nearby Genes

500 ntPf1N1B4_1008 and Pf1N1B4_1009 overlap by 4 nucleotidesPf1N1B4_1009 and Pf1N1B4_1010 are separated by 196 nucleotidesPf1N1B4_1010 and Pf1N1B4_1011 are separated by 143 nucleotidesPf1N1B4_1011 and Pf1N1B4_1012 are separated by 216 nucleotidesPf1N1B4_1012 and Pf1N1B4_1013 are separated by 135 nucleotidesPf1N1B4_1013 and Pf1N1B4_1014 are separated by 63 nucleotidesPf1N1B4_1014 and Pf1N1B4_1015 are separated by 235 nucleotidesPf1N1B4_1015 and Pf1N1B4_1016 overlap by 4 nucleotidesPf1N1B4_1016 and Pf1N1B4_1017 are separated by 359 nucleotidesPf1N1B4_1017 and Pf1N1B4_1018 are separated by 66 nucleotides Pf1N1B4_1008 - FIG006045: Sigma factor, ECF subfamily, at 1,142,897 to 1,143,391 _1008 Pf1N1B4_1009 - Iron siderophore sensor protein, at 1,143,388 to 1,144,326 _1009 Pf1N1B4_1010 - Iron(III) dicitrate transport protein FecA @ Iron siderophore receptor protein, at 1,144,523 to 1,146,856 _1010 Pf1N1B4_1011 - ribosomal subunit interface protein, putative, at 1,147,000 to 1,147,407 _1011 Pf1N1B4_1012 - Glycine cleavage system transcriptional activator, at 1,147,624 to 1,148,571 _1012 Pf1N1B4_1013 - L-serine ammonia-lyase (EC 4.3.1.17) (from data), at 1,148,707 to 1,150,083 _1013 Pf1N1B4_1014 - Serine transporter, at 1,150,147 to 1,151,448 _1014 Pf1N1B4_1015 - FIG00954638: hypothetical protein, at 1,151,684 to 1,151,998 _1015 Pf1N1B4_1016 - FIG00954263: hypothetical protein, at 1,151,995 to 1,152,495 _1016 Pf1N1B4_1017 - FIG00957554: hypothetical protein, at 1,152,855 to 1,153,220 _1017 Pf1N1B4_1018 - Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168), at 1,153,287 to 1,154,396 _1018
Locus Name Description Strand Phenotype
Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily + insig.
Pf1N1B4_1009 Iron siderophore sensor protein + insig.
Pf1N1B4_1010 Iron(III) dicitrate transport protein FecA @ Iron siderophore receptor protein + insig.
Pf1N1B4_1011 ribosomal subunit interface protein, putative - insig.
Pf1N1B4_1012 Glycine cleavage system transcriptional activator - strong
Pf1N1B4_1013 L-serine ammonia-lyase (EC 4.3.1.17) (from data) + strong
Pf1N1B4_1014 Serine transporter + strong
Pf1N1B4_1015 FIG00954638: hypothetical protein + no data
Pf1N1B4_1016 FIG00954263: hypothetical protein - insig.
Pf1N1B4_1017 FIG00957554: hypothetical protein + insig.
Pf1N1B4_1018 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) - insig.

Or browse nearby genes

Or see the comparative fitness browser