Gene info for Pf1N1B4_1008 in Pseudomonas fluorescens FW300-N1B4

Annotation: FIG006045: Sigma factor, ECF subfamily
Type 1: Protein-coding gene
Located on scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon, + strand, nucleotides 1,142,897 to 1,143,391
See nucleotide sequence around Pf1N1B4_1008 or for all of scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon

Other databases: uniprot: A0A166MYG1

Nearby Genes

500 ntPf1N1B4_1003 and Pf1N1B4_1004 are separated by 239 nucleotidesPf1N1B4_1004 and Pf1N1B4_1005 are separated by 336 nucleotidesPf1N1B4_1005 and Pf1N1B4_1006 are separated by 21 nucleotidesPf1N1B4_1006 and Pf1N1B4_1007 are separated by 283 nucleotidesPf1N1B4_1007 and Pf1N1B4_1008 are separated by 163 nucleotidesPf1N1B4_1008 and Pf1N1B4_1009 overlap by 4 nucleotidesPf1N1B4_1009 and Pf1N1B4_1010 are separated by 196 nucleotidesPf1N1B4_1010 and Pf1N1B4_1011 are separated by 143 nucleotidesPf1N1B4_1011 and Pf1N1B4_1012 are separated by 216 nucleotidesPf1N1B4_1012 and Pf1N1B4_1013 are separated by 135 nucleotides Pf1N1B4_1003 - Tryptophan synthase beta chain like (EC 4.2.1.20), at 1,138,528 to 1,138,734 _1003 Pf1N1B4_1004 - Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-), at 1,138,974 to 1,139,948 _1004 Pf1N1B4_1005 - probable membrane protein YPO0899, at 1,140,285 to 1,140,650 _1005 Pf1N1B4_1006 - Permease of the drug/metabolite transporter (DMT) superfamily, at 1,140,672 to 1,141,574 _1006 Pf1N1B4_1007 - Transcriptional regulator, AraC family, at 1,141,858 to 1,142,733 _1007 Pf1N1B4_1008 - FIG006045: Sigma factor, ECF subfamily, at 1,142,897 to 1,143,391 _1008 Pf1N1B4_1009 - Iron siderophore sensor protein, at 1,143,388 to 1,144,326 _1009 Pf1N1B4_1010 - Iron(III) dicitrate transport protein FecA @ Iron siderophore receptor protein, at 1,144,523 to 1,146,856 _1010 Pf1N1B4_1011 - ribosomal subunit interface protein, putative, at 1,147,000 to 1,147,407 _1011 Pf1N1B4_1012 - Glycine cleavage system transcriptional activator, at 1,147,624 to 1,148,571 _1012 Pf1N1B4_1013 - L-serine ammonia-lyase (EC 4.3.1.17) (from data), at 1,148,707 to 1,150,083 _1013
Locus Name Description Strand Phenotype
Pf1N1B4_1003 Tryptophan synthase beta chain like (EC 4.2.1.20) + insig.
Pf1N1B4_1004 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) + insig.
Pf1N1B4_1005 probable membrane protein YPO0899 + insig.
Pf1N1B4_1006 Permease of the drug/metabolite transporter (DMT) superfamily - strong
Pf1N1B4_1007 Transcriptional regulator, AraC family + insig.
Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily + insig.
Pf1N1B4_1009 Iron siderophore sensor protein + insig.
Pf1N1B4_1010 Iron(III) dicitrate transport protein FecA @ Iron siderophore receptor protein + insig.
Pf1N1B4_1011 ribosomal subunit interface protein, putative - insig.
Pf1N1B4_1012 Glycine cleavage system transcriptional activator - strong
Pf1N1B4_1013 L-serine ammonia-lyase (EC 4.3.1.17) (from data) + strong

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