Gene info for LRK55_RS18080 in Rhodanobacter denitrificans MT42

Annotation: tetratricopeptide repeat protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, + strand, nucleotides 3,921,633 to 3,922,283
See nucleotide sequence around LRK55_RS18080 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS18055 and LRK55_RS18060 are separated by 224 nucleotidesLRK55_RS18060 and LRK55_RS18065 are separated by 2 nucleotidesLRK55_RS18065 and LRK55_RS18070 overlap by 11 nucleotidesLRK55_RS18070 and LRK55_RS18075 are separated by 5 nucleotidesLRK55_RS18075 and LRK55_RS18080 are separated by 153 nucleotidesLRK55_RS18080 and LRK55_RS18085 are separated by 8 nucleotidesLRK55_RS18085 and LRK55_RS18090 are separated by 22 nucleotidesLRK55_RS18090 and LRK55_RS18095 are separated by 90 nucleotidesLRK55_RS18095 and LRK55_RS18100 are separated by 89 nucleotidesLRK55_RS18100 and LRK55_RS18105 are separated by 132 nucleotides LRK55_RS18055: LRK55_RS18055 - TetR/AcrR family transcriptional regulator, at 3,917,300 to 3,917,926 _RS18055 LRK55_RS18060: LRK55_RS18060 - nucleoside-diphosphate kinase, at 3,918,151 to 3,918,576 _RS18060 LRK55_RS18065: LRK55_RS18065 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 3,918,579 to 3,919,709 _RS18065 LRK55_RS18070: LRK55_RS18070 - type IV pilus biogenesis/stability protein PilW, at 3,919,699 to 3,920,487 _RS18070 LRK55_RS18075: LRK55_RS18075 - helix-turn-helix domain-containing protein, at 3,920,493 to 3,921,479 _RS18075 LRK55_RS18080: LRK55_RS18080 - tetratricopeptide repeat protein, at 3,921,633 to 3,922,283 _RS18080 LRK55_RS18085: LRK55_RS18085 - outer membrane protein assembly factor BamB, at 3,922,292 to 3,923,491 _RS18085 LRK55_RS18090: LRK55_RS18090 - ribosome biogenesis GTPase Der, at 3,923,514 to 3,924,917 _RS18090 LRK55_RS18095: LRK55_RS18095 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD, at 3,925,008 to 3,925,877 _RS18095 LRK55_RS18100: LRK55_RS18100 - IMP dehydrogenase, at 3,925,967 to 3,927,424 _RS18100 LRK55_RS18105: LRK55_RS18105 - glutamine-hydrolyzing GMP synthase, at 3,927,557 to 3,929,161 _RS18105
Locus Name Description Strand Phenotype
LRK55_RS18055 LRK55_RS18055 TetR/AcrR family transcriptional regulator - cofit
LRK55_RS18060 LRK55_RS18060 nucleoside-diphosphate kinase + no data
LRK55_RS18065 LRK55_RS18065 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN + cofit
LRK55_RS18070 LRK55_RS18070 type IV pilus biogenesis/stability protein PilW + cofit
LRK55_RS18075 LRK55_RS18075 helix-turn-helix domain-containing protein + strong
LRK55_RS18080 LRK55_RS18080 tetratricopeptide repeat protein + insig.
LRK55_RS18085 LRK55_RS18085 outer membrane protein assembly factor BamB + no data
LRK55_RS18090 LRK55_RS18090 ribosome biogenesis GTPase Der + no data
LRK55_RS18095 LRK55_RS18095 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD + no data
LRK55_RS18100 LRK55_RS18100 IMP dehydrogenase + no data
LRK55_RS18105 LRK55_RS18105 glutamine-hydrolyzing GMP synthase + cofit

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