Gene info for LRK55_RS16390 in Rhodanobacter denitrificans MT42

Annotation: peptidoglycan DD-metalloendopeptidase family protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, + strand, nucleotides 3,570,882 to 3,571,883
See nucleotide sequence around LRK55_RS16390 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS16365 and LRK55_RS16370 are separated by 96 nucleotidesLRK55_RS16370 and LRK55_RS16375 are separated by 140 nucleotidesLRK55_RS16375 and LRK55_RS16380 are separated by 3 nucleotidesLRK55_RS16380 and LRK55_RS16385 overlap by 1 nucleotidesLRK55_RS16385 and LRK55_RS16390 are separated by 52 nucleotidesLRK55_RS16390 and LRK55_RS16395 are separated by 64 nucleotidesLRK55_RS16395 and LRK55_RS16400 overlap by 1 nucleotidesLRK55_RS16400 and LRK55_RS16405 are separated by 81 nucleotidesLRK55_RS16405 and LRK55_RS16410 overlap by 4 nucleotidesLRK55_RS16410 and LRK55_RS16415 are separated by 270 nucleotides LRK55_RS16365: LRK55_RS16365 - tRNA pseudouridine(13) synthase TruD, at 3,566,944 to 3,567,954 _RS16365 LRK55_RS16370: LRK55_RS16370 - Smr/MutS family protein, at 3,568,051 to 3,568,596 _RS16370 LRK55_RS16375: LRK55_RS16375 - 5'/3'-nucleotidase SurE, at 3,568,737 to 3,569,534 _RS16375 LRK55_RS16380: LRK55_RS16380 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 3,569,538 to 3,570,218 _RS16380 LRK55_RS16385: LRK55_RS16385 - VTT domain-containing protein, at 3,570,218 to 3,570,829 _RS16385 LRK55_RS16390: LRK55_RS16390 - peptidoglycan DD-metalloendopeptidase family protein, at 3,570,882 to 3,571,883 _RS16390 LRK55_RS16395: LRK55_RS16395 - Mth938-like domain-containing protein, at 3,571,948 to 3,572,316 _RS16395 LRK55_RS16400: LRK55_RS16400 - ribosome assembly RNA-binding protein YhbY, at 3,572,316 to 3,572,612 _RS16400 LRK55_RS16405: LRK55_RS16405 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE, at 3,572,694 to 3,573,344 _RS16405 LRK55_RS16410: LRK55_RS16410 - ATP-dependent zinc metalloprotease FtsH, at 3,573,341 to 3,575,299 _RS16410 LRK55_RS16415: LRK55_RS16415 - tRNA-Arg, at 3,575,570 to 3,575,646 _RS16415
Locus Name Description Strand Phenotype
LRK55_RS16365 LRK55_RS16365 tRNA pseudouridine(13) synthase TruD + insig.
LRK55_RS16370 LRK55_RS16370 Smr/MutS family protein - cofit
LRK55_RS16375 LRK55_RS16375 5'/3'-nucleotidase SurE + strong
LRK55_RS16380 LRK55_RS16380 protein-L-isoaspartate(D-aspartate) O-methyltransferase + no data
LRK55_RS16385 LRK55_RS16385 VTT domain-containing protein + strong
LRK55_RS16390 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein + no data
LRK55_RS16395 LRK55_RS16395 Mth938-like domain-containing protein - cofit
LRK55_RS16400 LRK55_RS16400 ribosome assembly RNA-binding protein YhbY - insig.
LRK55_RS16405 LRK55_RS16405 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE + strong
LRK55_RS16410 LRK55_RS16410 ATP-dependent zinc metalloprotease FtsH + no data
LRK55_RS16415 LRK55_RS16415 tRNA-Arg + no data

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