Gene info for LRK55_RS13470 in Rhodanobacter denitrificans MT42

Annotation: lytic transglycosylase domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, + strand, nucleotides 2,993,862 to 2,994,890
See nucleotide sequence around LRK55_RS13470 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS13445 and LRK55_RS13450 are separated by 116 nucleotidesLRK55_RS13450 and LRK55_RS13455 are separated by 126 nucleotidesLRK55_RS13455 and LRK55_RS13460 overlap by 4 nucleotidesLRK55_RS13460 and LRK55_RS13465 are separated by 97 nucleotidesLRK55_RS13465 and LRK55_RS13470 are separated by 329 nucleotidesLRK55_RS13470 and LRK55_RS13475 are separated by 10 nucleotidesLRK55_RS13475 and LRK55_RS13480 are separated by 160 nucleotidesLRK55_RS13480 and LRK55_RS13485 overlap by 1 nucleotidesLRK55_RS13485 and LRK55_RS13490 are separated by 13 nucleotidesLRK55_RS13490 and LRK55_RS13495 are separated by 73 nucleotides LRK55_RS13445: LRK55_RS13445 - DUF4105 domain-containing protein, at 2,988,359 to 2,989,567 _RS13445 LRK55_RS13450: LRK55_RS13450 - transporter associated domain-containing protein, at 2,989,684 to 2,990,523 _RS13450 LRK55_RS13455: LRK55_RS13455 - rRNA maturation RNase YbeY, at 2,990,650 to 2,991,111 _RS13455 LRK55_RS13460: LRK55_RS13460 - PhoH family protein, at 2,991,108 to 2,992,091 _RS13460 LRK55_RS13465: LRK55_RS13465 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 2,992,189 to 2,993,532 _RS13465 LRK55_RS13470: LRK55_RS13470 - lytic transglycosylase domain-containing protein, at 2,993,862 to 2,994,890 _RS13470 LRK55_RS13475: LRK55_RS13475 - trypsin-like peptidase domain-containing protein, at 2,994,901 to 2,996,076 _RS13475 LRK55_RS13480: LRK55_RS13480 - ubiquinol-cytochrome c reductase iron-sulfur subunit, at 2,996,237 to 2,996,842 _RS13480 LRK55_RS13485: LRK55_RS13485 - cytochrome bc complex cytochrome b subunit, at 2,996,842 to 2,998,143 _RS13485 LRK55_RS13490: LRK55_RS13490 - cytochrome c1, at 2,998,157 to 2,998,894 _RS13490 LRK55_RS13495: LRK55_RS13495 - glutathione S-transferase N-terminal domain-containing protein, at 2,998,968 to 2,999,606 _RS13495
Locus Name Description Strand Phenotype
LRK55_RS13445 LRK55_RS13445 DUF4105 domain-containing protein - no data
LRK55_RS13450 LRK55_RS13450 transporter associated domain-containing protein - strong
LRK55_RS13455 LRK55_RS13455 rRNA maturation RNase YbeY - no data
LRK55_RS13460 LRK55_RS13460 PhoH family protein - insig.
LRK55_RS13465 LRK55_RS13465 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB - sig.
LRK55_RS13470 LRK55_RS13470 lytic transglycosylase domain-containing protein + cofit
LRK55_RS13475 LRK55_RS13475 trypsin-like peptidase domain-containing protein - strong
LRK55_RS13480 LRK55_RS13480 ubiquinol-cytochrome c reductase iron-sulfur subunit + no data
LRK55_RS13485 LRK55_RS13485 cytochrome bc complex cytochrome b subunit + cofit
LRK55_RS13490 LRK55_RS13490 cytochrome c1 + cofit
LRK55_RS13495 LRK55_RS13495 glutathione S-transferase N-terminal domain-containing protein + strong

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