Gene info for LRK55_RS11880 in Rhodanobacter denitrificans MT42

Annotation: PepSY-associated TM helix domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, - strand, nucleotides 2,633,148 to 2,634,257
See nucleotide sequence around LRK55_RS11880 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS11855 and LRK55_RS11860 are separated by 147 nucleotidesLRK55_RS11860 and LRK55_RS11865 are separated by 101 nucleotidesLRK55_RS11865 and LRK55_RS11870 are separated by 180 nucleotidesLRK55_RS11870 and LRK55_RS11875 are separated by 541 nucleotidesLRK55_RS11875 and LRK55_RS11880 are separated by 55 nucleotidesLRK55_RS11880 and LRK55_RS11885 are separated by 1 nucleotidesLRK55_RS11885 and LRK55_RS11890 are separated by 12 nucleotidesLRK55_RS11890 and LRK55_RS11895 overlap by 4 nucleotidesLRK55_RS11895 and LRK55_RS11900 are separated by 80 nucleotidesLRK55_RS11900 and LRK55_RS11905 are separated by 107 nucleotides LRK55_RS11855: LRK55_RS11855 - glutathione S-transferase family protein, at 2,625,149 to 2,625,778 _RS11855 LRK55_RS11860: LRK55_RS11860 - ATP-binding cassette domain-containing protein, at 2,625,926 to 2,627,788 _RS11860 LRK55_RS11865: LRK55_RS11865 - methionine adenosyltransferase, at 2,627,890 to 2,629,089 _RS11865 LRK55_RS11870: LRK55_RS11870 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 2,629,270 to 2,631,564 _RS11870 LRK55_RS11875: LRK55_RS11875 - tRNA dihydrouridine synthase DusB, at 2,632,106 to 2,633,092 _RS11875 LRK55_RS11880: LRK55_RS11880 - PepSY-associated TM helix domain-containing protein, at 2,633,148 to 2,634,257 _RS11880 LRK55_RS11885: LRK55_RS11885 - TonB-dependent receptor, at 2,634,259 to 2,635,749 _RS11885 LRK55_RS11890: LRK55_RS11890 - TonB-dependent receptor plug domain-containing protein, at 2,635,762 to 2,636,214 _RS11890 LRK55_RS11895: LRK55_RS11895 - hypothetical protein, at 2,636,211 to 2,636,375 _RS11895 LRK55_RS11900: LRK55_RS11900 - nucleoside permease, at 2,636,456 to 2,637,736 _RS11900 LRK55_RS11905: LRK55_RS11905 - uracil-DNA glycosylase family protein, at 2,637,844 to 2,638,428 _RS11905
Locus Name Description Strand Phenotype
LRK55_RS11855 LRK55_RS11855 glutathione S-transferase family protein - insig.
LRK55_RS11860 LRK55_RS11860 ATP-binding cassette domain-containing protein - insig.
LRK55_RS11865 LRK55_RS11865 methionine adenosyltransferase - no data
LRK55_RS11870 LRK55_RS11870 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase - cofit
LRK55_RS11875 LRK55_RS11875 tRNA dihydrouridine synthase DusB - cofit
LRK55_RS11880 LRK55_RS11880 PepSY-associated TM helix domain-containing protein - strong
LRK55_RS11885 LRK55_RS11885 TonB-dependent receptor - strong
LRK55_RS11890 LRK55_RS11890 TonB-dependent receptor plug domain-containing protein - strong
LRK55_RS11895 LRK55_RS11895 hypothetical protein - no data
LRK55_RS11900 LRK55_RS11900 nucleoside permease - cofit
LRK55_RS11905 LRK55_RS11905 uracil-DNA glycosylase family protein - cofit

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