Gene info for LRK55_RS09780 in Rhodanobacter denitrificans MT42

Annotation: LysM domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, + strand, nucleotides 2,139,481 to 2,140,602
See nucleotide sequence around LRK55_RS09780 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS09755 and LRK55_RS09760 are separated by 157 nucleotidesLRK55_RS09760 and LRK55_RS09765 are separated by 96 nucleotidesLRK55_RS09765 and LRK55_RS09770 overlap by 1 nucleotidesLRK55_RS09770 and LRK55_RS09775 are separated by 11 nucleotidesLRK55_RS09775 and LRK55_RS09780 are separated by 189 nucleotidesLRK55_RS09780 and LRK55_RS09785 are separated by 92 nucleotidesLRK55_RS09785 and LRK55_RS09790 are separated by 121 nucleotidesLRK55_RS09790 and LRK55_RS09795 are separated by 0 nucleotidesLRK55_RS09795 and LRK55_RS09800 are separated by 136 nucleotidesLRK55_RS09800 and LRK55_RS09805 are separated by 106 nucleotides LRK55_RS09755: LRK55_RS09755 - O-antigen ligase family protein, at 2,133,338 to 2,134,588 _RS09755 LRK55_RS09760: LRK55_RS09760 - glycosyltransferase family 39 protein, at 2,134,746 to 2,136,449 _RS09760 LRK55_RS09765: LRK55_RS09765 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 2,136,546 to 2,137,847 _RS09765 LRK55_RS09770: LRK55_RS09770 - methionyl-tRNA formyltransferase, at 2,137,847 to 2,138,770 _RS09770 LRK55_RS09775: LRK55_RS09775 - peptide deformylase, at 2,138,782 to 2,139,291 _RS09775 LRK55_RS09780: LRK55_RS09780 - LysM domain-containing protein, at 2,139,481 to 2,140,602 _RS09780 LRK55_RS09785: LRK55_RS09785 - DNA-processing protein DprA, at 2,140,695 to 2,141,870 _RS09785 LRK55_RS09790: LRK55_RS09790 - DNA topoisomerase I, at 2,141,992 to 2,144,493 _RS09790 LRK55_RS09795: LRK55_RS09795 - Sua5/YciO/YrdC/YwlC family protein, at 2,144,494 to 2,145,066 _RS09795 LRK55_RS09800: LRK55_RS09800 - AMP-binding protein, at 2,145,203 to 2,146,582 _RS09800 LRK55_RS09805: LRK55_RS09805 - phosphoribosylamine--glycine ligase, at 2,146,689 to 2,147,987 _RS09805
Locus Name Description Strand Phenotype
LRK55_RS09755 LRK55_RS09755 O-antigen ligase family protein - cofit
LRK55_RS09760 LRK55_RS09760 glycosyltransferase family 39 protein - cofit
LRK55_RS09765 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB - insig.
LRK55_RS09770 LRK55_RS09770 methionyl-tRNA formyltransferase - no data
LRK55_RS09775 LRK55_RS09775 peptide deformylase - cofit
LRK55_RS09780 LRK55_RS09780 LysM domain-containing protein + cofit
LRK55_RS09785 LRK55_RS09785 DNA-processing protein DprA + cofit
LRK55_RS09790 LRK55_RS09790 DNA topoisomerase I + no data
LRK55_RS09795 LRK55_RS09795 Sua5/YciO/YrdC/YwlC family protein + no data
LRK55_RS09800 LRK55_RS09800 AMP-binding protein + strong
LRK55_RS09805 LRK55_RS09805 phosphoribosylamine--glycine ligase + strong

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