Gene info for LRK55_RS09030 in Rhodanobacter denitrificans MT42

Annotation: sigma factor
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, - strand, nucleotides 1,980,627 to 1,981,889
See nucleotide sequence around LRK55_RS09030 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS09005 and LRK55_RS09010 overlap by 11 nucleotidesLRK55_RS09010 and LRK55_RS09015 overlap by 4 nucleotidesLRK55_RS09015 and LRK55_RS09020 overlap by 4 nucleotidesLRK55_RS09020 and LRK55_RS09025 overlap by 4 nucleotidesLRK55_RS09025 and LRK55_RS09030 overlap by 115 nucleotidesLRK55_RS09030 and LRK55_RS09035 are separated by 31 nucleotidesLRK55_RS09035 and LRK55_RS09040 are separated by 182 nucleotidesLRK55_RS09040 and LRK55_RS09045 are separated by 9 nucleotidesLRK55_RS09045 and LRK55_RS09050 are separated by 363 nucleotidesLRK55_RS09050 and LRK55_RS09055 are separated by 132 nucleotides LRK55_RS09005: LRK55_RS09005 - AIPR family protein, at 1,972,998 to 1,974,791 _RS09005 LRK55_RS09010: LRK55_RS09010 - PD-(D/E)XK motif protein, at 1,974,781 to 1,975,776 _RS09010 LRK55_RS09015: LRK55_RS09015 - Z1 domain-containing protein, at 1,975,773 to 1,978,667 _RS09015 LRK55_RS09020: LRK55_RS09020 - ATP-binding protein, at 1,978,664 to 1,980,175 _RS09020 LRK55_RS09025: LRK55_RS09025 - sigma-70 family RNA polymerase sigma factor, at 1,980,172 to 1,980,741 _RS09025 LRK55_RS09030: LRK55_RS09030 - sigma factor, at 1,980,627 to 1,981,889 _RS09030 LRK55_RS09035: LRK55_RS09035 - DNA (cytosine-5-)-methyltransferase, at 1,981,921 to 1,983,483 _RS09035 LRK55_RS09040: LRK55_RS09040 - very short patch repair endonuclease, at 1,983,666 to 1,984,070 _RS09040 LRK55_RS09045: LRK55_RS09045 - IS3 family transposase, at 1,984,080 to 1,985,095 _RS09045 LRK55_RS09050: LRK55_RS09050 - helix-turn-helix transcriptional regulator, at 1,985,459 to 1,985,710 _RS09050 LRK55_RS09055: LRK55_RS09055 - hypothetical protein, at 1,985,843 to 1,986,079 _RS09055
Locus Name Description Strand Phenotype
LRK55_RS09005 LRK55_RS09005 AIPR family protein - cofit
LRK55_RS09010 LRK55_RS09010 PD-(D/E)XK motif protein - insig.
LRK55_RS09015 LRK55_RS09015 Z1 domain-containing protein - insig.
LRK55_RS09020 LRK55_RS09020 ATP-binding protein - cofit
LRK55_RS09025 LRK55_RS09025 sigma-70 family RNA polymerase sigma factor - insig.
LRK55_RS09030 LRK55_RS09030 sigma factor - cofit
LRK55_RS09035 LRK55_RS09035 DNA (cytosine-5-)-methyltransferase - strong
LRK55_RS09040 LRK55_RS09040 very short patch repair endonuclease + cofit
LRK55_RS09045 LRK55_RS09045 IS3 family transposase - no data
LRK55_RS09050 LRK55_RS09050 helix-turn-helix transcriptional regulator - no data
LRK55_RS09055 LRK55_RS09055 hypothetical protein + cofit

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