Gene info for LRK55_RS06445 in Rhodanobacter denitrificans MT42

Annotation: polysaccharide deacetylase family protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, + strand, nucleotides 1,393,392 to 1,394,093
See nucleotide sequence around LRK55_RS06445 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS06420 and LRK55_RS06425 are separated by 272 nucleotidesLRK55_RS06425 and LRK55_RS06430 are separated by 34 nucleotidesLRK55_RS06430 and LRK55_RS06435 are separated by 62 nucleotidesLRK55_RS06435 and LRK55_RS06440 are separated by 115 nucleotidesLRK55_RS06440 and LRK55_RS06445 are separated by 271 nucleotidesLRK55_RS06445 and LRK55_RS06450 overlap by 4 nucleotidesLRK55_RS06450 and LRK55_RS06455 are separated by 10 nucleotidesLRK55_RS06455 and LRK55_RS06460 overlap by 11 nucleotidesLRK55_RS06460 and LRK55_RS06465 are separated by 60 nucleotidesLRK55_RS06465 and LRK55_RS06470 are separated by 78 nucleotides LRK55_RS06420: LRK55_RS06420 - TetR/AcrR family transcriptional regulator, at 1,387,844 to 1,388,491 _RS06420 LRK55_RS06425: LRK55_RS06425 - protein-L-isoaspartate O-methyltransferase, at 1,388,764 to 1,389,423 _RS06425 LRK55_RS06430: LRK55_RS06430 - TolC family outer membrane protein, at 1,389,458 to 1,390,759 _RS06430 LRK55_RS06435: LRK55_RS06435 - lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase, at 1,390,822 to 1,392,087 _RS06435 LRK55_RS06440: LRK55_RS06440 - LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase, at 1,392,203 to 1,393,120 _RS06440 LRK55_RS06445: LRK55_RS06445 - polysaccharide deacetylase family protein, at 1,393,392 to 1,394,093 _RS06445 LRK55_RS06450: LRK55_RS06450 - glycosyltransferase family 4 protein, at 1,394,090 to 1,395,166 _RS06450 LRK55_RS06455: LRK55_RS06455 - glycosyltransferase family 2 protein, at 1,395,177 to 1,395,929 _RS06455 LRK55_RS06460: LRK55_RS06460 - O-antigen ligase family protein, at 1,395,919 to 1,397,250 _RS06460 LRK55_RS06465: LRK55_RS06465 - glycosyltransferase, at 1,397,311 to 1,398,438 _RS06465 LRK55_RS06470: LRK55_RS06470 - zinc-finger domain-containing protein, at 1,398,517 to 1,398,726 _RS06470
Locus Name Description Strand Phenotype
LRK55_RS06420 LRK55_RS06420 TetR/AcrR family transcriptional regulator - strong
LRK55_RS06425 LRK55_RS06425 protein-L-isoaspartate O-methyltransferase + no data
LRK55_RS06430 LRK55_RS06430 TolC family outer membrane protein + strong
LRK55_RS06435 LRK55_RS06435 lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase - no data
LRK55_RS06440 LRK55_RS06440 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase + no data
LRK55_RS06445 LRK55_RS06445 polysaccharide deacetylase family protein + cofit
LRK55_RS06450 LRK55_RS06450 glycosyltransferase family 4 protein + cofit
LRK55_RS06455 LRK55_RS06455 glycosyltransferase family 2 protein - insig.
LRK55_RS06460 LRK55_RS06460 O-antigen ligase family protein - cofit
LRK55_RS06465 LRK55_RS06465 glycosyltransferase - cofit
LRK55_RS06470 LRK55_RS06470 zinc-finger domain-containing protein - cofit

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