Gene info for LRK55_RS06115 in Rhodanobacter denitrificans MT42

Annotation: benenodin family lasso peptide
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, + strand, nucleotides 1,312,934 to 1,313,080
See nucleotide sequence around LRK55_RS06115 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS06090 and LRK55_RS06095 are separated by 143 nucleotidesLRK55_RS06095 and LRK55_RS06100 are separated by 362 nucleotidesLRK55_RS06100 and LRK55_RS06105 are separated by 383 nucleotidesLRK55_RS06105 and LRK55_RS06110 are separated by 176 nucleotidesLRK55_RS06110 and LRK55_RS06115 are separated by 427 nucleotidesLRK55_RS06115 and LRK55_RS06120 are separated by 50 nucleotidesLRK55_RS06120 and LRK55_RS06125 overlap by 1 nucleotidesLRK55_RS06125 and LRK55_RS06130 overlap by 16 nucleotidesLRK55_RS06130 and LRK55_RS06135 are separated by 10 nucleotidesLRK55_RS06135 and LRK55_RS06140 are separated by 279 nucleotides LRK55_RS06090: LRK55_RS06090 - VOC family protein, at 1,308,455 to 1,308,856 _RS06090 LRK55_RS06095: LRK55_RS06095 - tetratricopeptide repeat protein, at 1,309,000 to 1,310,118 _RS06095 LRK55_RS06100: LRK55_RS06100 - hypothetical protein, at 1,310,481 to 1,310,909 _RS06100 LRK55_RS06105: LRK55_RS06105 - GntR family transcriptional regulator, at 1,311,293 to 1,311,913 _RS06105 LRK55_RS06110: LRK55_RS06110 - H-NS histone family protein, at 1,312,090 to 1,312,506 _RS06110 LRK55_RS06115: LRK55_RS06115 - benenodin family lasso peptide, at 1,312,934 to 1,313,080 _RS06115 LRK55_RS06120: LRK55_RS06120 - lasso peptide biosynthesis B2 protein, at 1,313,131 to 1,313,817 _RS06120 LRK55_RS06125: LRK55_RS06125 - asparagine synthase C-terminal domain-containing protein, at 1,313,817 to 1,315,565 _RS06125 LRK55_RS06130: LRK55_RS06130 - Atxe2 family lasso peptide isopeptidase, at 1,315,550 to 1,317,730 _RS06130 LRK55_RS06135: LRK55_RS06135 - TonB-dependent receptor, at 1,317,741 to 1,320,377 _RS06135 LRK55_RS06140: LRK55_RS06140 - helix-turn-helix transcriptional regulator, at 1,320,657 to 1,320,977 _RS06140
Locus Name Description Strand Phenotype
LRK55_RS06090 LRK55_RS06090 VOC family protein + insig.
LRK55_RS06095 LRK55_RS06095 tetratricopeptide repeat protein - insig.
LRK55_RS06100 LRK55_RS06100 hypothetical protein - cofit
LRK55_RS06105 LRK55_RS06105 GntR family transcriptional regulator + insig.
LRK55_RS06110 LRK55_RS06110 H-NS histone family protein - insig.
LRK55_RS06115 LRK55_RS06115 benenodin family lasso peptide + insig.
LRK55_RS06120 LRK55_RS06120 lasso peptide biosynthesis B2 protein + insig.
LRK55_RS06125 LRK55_RS06125 asparagine synthase C-terminal domain-containing protein + insig.
LRK55_RS06130 LRK55_RS06130 Atxe2 family lasso peptide isopeptidase - cofit
LRK55_RS06135 LRK55_RS06135 TonB-dependent receptor - cofit
LRK55_RS06140 LRK55_RS06140 helix-turn-helix transcriptional regulator + cofit

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