Gene info for LRK55_RS04740 in Rhodanobacter denitrificans MT42

Annotation: peptidoglycan editing factor PgeF
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, - strand, nucleotides 1,008,437 to 1,009,186
See nucleotide sequence around LRK55_RS04740 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS04715 and LRK55_RS04720 are separated by 138 nucleotidesLRK55_RS04720 and LRK55_RS04725 are separated by 291 nucleotidesLRK55_RS04725 and LRK55_RS04730 are separated by 376 nucleotidesLRK55_RS04730 and LRK55_RS04735 are separated by 192 nucleotidesLRK55_RS04735 and LRK55_RS04740 are separated by 131 nucleotidesLRK55_RS04740 and LRK55_RS04745 are separated by 93 nucleotidesLRK55_RS04745 and LRK55_RS04750 are separated by 104 nucleotidesLRK55_RS04750 and LRK55_RS04755 are separated by 196 nucleotidesLRK55_RS04755 and LRK55_RS04760 are separated by 76 nucleotidesLRK55_RS04760 and LRK55_RS04765 are separated by 14 nucleotides LRK55_RS04715: LRK55_RS04715 - DUF3011 domain-containing protein, at 1,001,135 to 1,001,731 _RS04715 LRK55_RS04720: LRK55_RS04720 - zinc ribbon domain-containing protein, at 1,001,870 to 1,002,166 _RS04720 LRK55_RS04725: LRK55_RS04725 - TonB-dependent receptor, at 1,002,458 to 1,004,830 _RS04725 LRK55_RS04730: LRK55_RS04730 - CsgG/HfaB family protein, at 1,005,207 to 1,005,521 _RS04730 LRK55_RS04735: LRK55_RS04735 - ATP-dependent chaperone ClpB, at 1,005,714 to 1,008,305 _RS04735 LRK55_RS04740: LRK55_RS04740 - peptidoglycan editing factor PgeF, at 1,008,437 to 1,009,186 _RS04740 LRK55_RS04745: LRK55_RS04745 - 23S rRNA pseudouridine(1911/1915/1917) synthase RluD, at 1,009,280 to 1,010,254 _RS04745 LRK55_RS04750: LRK55_RS04750 - outer membrane protein assembly factor BamD, at 1,010,359 to 1,011,192 _RS04750 LRK55_RS04755: LRK55_RS04755 - NAD+ synthase, at 1,011,389 to 1,013,047 _RS04755 LRK55_RS04760: LRK55_RS04760 - succinate--CoA ligase subunit alpha, at 1,013,124 to 1,013,996 _RS04760 LRK55_RS04765: LRK55_RS04765 - ADP-forming succinate--CoA ligase subunit beta, at 1,014,011 to 1,015,297 _RS04765
Locus Name Description Strand Phenotype
LRK55_RS04715 LRK55_RS04715 DUF3011 domain-containing protein - cofit
LRK55_RS04720 LRK55_RS04720 zinc ribbon domain-containing protein - no data
LRK55_RS04725 LRK55_RS04725 TonB-dependent receptor + cofit
LRK55_RS04730 LRK55_RS04730 CsgG/HfaB family protein + insig.
LRK55_RS04735 LRK55_RS04735 ATP-dependent chaperone ClpB - cofit
LRK55_RS04740 LRK55_RS04740 peptidoglycan editing factor PgeF - insig.
LRK55_RS04745 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD - strong
LRK55_RS04750 LRK55_RS04750 outer membrane protein assembly factor BamD + no data
LRK55_RS04755 LRK55_RS04755 NAD+ synthase - no data
LRK55_RS04760 LRK55_RS04760 succinate--CoA ligase subunit alpha - insig.
LRK55_RS04765 LRK55_RS04765 ADP-forming succinate--CoA ligase subunit beta - strong

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