Gene info for LRK55_RS01970 in Rhodanobacter denitrificans MT42

Annotation: GspH/FimT family pseudopilin
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, - strand, nucleotides 432,680 to 433,312
See nucleotide sequence around LRK55_RS01970 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS01945 and LRK55_RS01950 overlap by 23 nucleotidesLRK55_RS01950 and LRK55_RS01955 are separated by 21 nucleotidesLRK55_RS01955 and LRK55_RS01960 are separated by 1 nucleotidesLRK55_RS01960 and LRK55_RS01965 overlap by 4 nucleotidesLRK55_RS01965 and LRK55_RS01970 overlap by 4 nucleotidesLRK55_RS01970 and LRK55_RS01975 are separated by 176 nucleotidesLRK55_RS01975 and LRK55_RS01980 are separated by 279 nucleotidesLRK55_RS01980 and LRK55_RS01985 are separated by 172 nucleotidesLRK55_RS01985 and LRK55_RS01990 are separated by 100 nucleotidesLRK55_RS01990 and LRK55_RS01995 are separated by 159 nucleotides LRK55_RS01945: LRK55_RS01945 - PilC/PilY family type IV pilus protein, at 426,632 to 430,291 _RS01945 LRK55_RS01950: LRK55_RS01950 - hypothetical protein, at 430,269 to 430,475 _RS01950 LRK55_RS01955: LRK55_RS01955 - PilX N-terminal domain-containing pilus assembly protein, at 430,497 to 431,105 _RS01955 LRK55_RS01960: LRK55_RS01960 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 431,107 to 432,159 _RS01960 LRK55_RS01965: LRK55_RS01965 - type IV pilus modification protein PilV, at 432,156 to 432,683 _RS01965 LRK55_RS01970: LRK55_RS01970 - GspH/FimT family pseudopilin, at 432,680 to 433,312 _RS01970 LRK55_RS01975: LRK55_RS01975 - GGDEF domain-containing protein, at 433,489 to 435,345 _RS01975 LRK55_RS01980: LRK55_RS01980 - tRNA-Thr, at 435,625 to 435,700 _RS01980 LRK55_RS01985: LRK55_RS01985 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 435,873 to 436,835 _RS01985 LRK55_RS01990: LRK55_RS01990 - signal peptidase II, at 436,936 to 437,436 _RS01990 LRK55_RS01995: LRK55_RS01995 - isoleucine--tRNA ligase, at 437,596 to 440,457 _RS01995
Locus Name Description Strand Phenotype
LRK55_RS01945 LRK55_RS01945 PilC/PilY family type IV pilus protein - cofit
LRK55_RS01950 LRK55_RS01950 hypothetical protein + cofit
LRK55_RS01955 LRK55_RS01955 PilX N-terminal domain-containing pilus assembly protein - cofit
LRK55_RS01960 LRK55_RS01960 prepilin-type N-terminal cleavage/methylation domain-containing protein - cofit
LRK55_RS01965 LRK55_RS01965 type IV pilus modification protein PilV - cofit
LRK55_RS01970 LRK55_RS01970 GspH/FimT family pseudopilin - cofit
LRK55_RS01975 LRK55_RS01975 GGDEF domain-containing protein - insig.
LRK55_RS01980 LRK55_RS01980 tRNA-Thr + no data
LRK55_RS01985 LRK55_RS01985 4-hydroxy-3-methylbut-2-enyl diphosphate reductase - no data
LRK55_RS01990 LRK55_RS01990 signal peptidase II - no data
LRK55_RS01995 LRK55_RS01995 isoleucine--tRNA ligase - no data

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