Gene info for LRK55_RS00325 in Rhodanobacter denitrificans MT42

Annotation: type I restriction endonuclease
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, - strand, nucleotides 60,277 to 63,357
See nucleotide sequence around LRK55_RS00325 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS00300 and LRK55_RS00305 are separated by 121 nucleotidesLRK55_RS00305 and LRK55_RS00310 are separated by 106 nucleotidesLRK55_RS00310 and LRK55_RS00315 are separated by 66 nucleotidesLRK55_RS00315 and LRK55_RS00320 are separated by 175 nucleotidesLRK55_RS00320 and LRK55_RS00325 are separated by 482 nucleotidesLRK55_RS00325 and LRK55_RS00330 are separated by 2 nucleotidesLRK55_RS00330 and LRK55_RS00335 overlap by 4 nucleotidesLRK55_RS00335 and LRK55_RS00340 overlap by 4 nucleotidesLRK55_RS00340 and LRK55_RS00345 are separated by 103 nucleotidesLRK55_RS00345 and LRK55_RS00350 are separated by 266 nucleotides LRK55_RS00300: LRK55_RS00300 - RNA polymerase sigma factor, at 54,836 to 55,327 _RS00300 LRK55_RS00305: LRK55_RS00305 - S8 family serine peptidase, at 55,449 to 56,696 _RS00305 LRK55_RS00310: LRK55_RS00310 - hypothetical protein, at 56,803 to 57,849 _RS00310 LRK55_RS00315: LRK55_RS00315 - ISL3 family transposase, at 57,916 to 59,124 _RS00315 LRK55_RS00320: LRK55_RS00320 - hypothetical protein, at 59,300 to 59,794 _RS00320 LRK55_RS00325: LRK55_RS00325 - type I restriction endonuclease, at 60,277 to 63,357 _RS00325 LRK55_RS00330: LRK55_RS00330 - hypothetical protein, at 63,360 to 63,971 _RS00330 LRK55_RS00335: LRK55_RS00335 - restriction endonuclease subunit S, at 63,968 to 65,257 _RS00335 LRK55_RS00340: LRK55_RS00340 - class I SAM-dependent DNA methyltransferase, at 65,254 to 67,455 _RS00340 LRK55_RS00345: LRK55_RS00345 - restriction endonuclease, at 67,559 to 68,443 _RS00345 LRK55_RS00350: LRK55_RS00350 - HD domain-containing protein, at 68,710 to 69,342 _RS00350
Locus Name Description Strand Phenotype
LRK55_RS00300 LRK55_RS00300 RNA polymerase sigma factor - cofit
LRK55_RS00305 LRK55_RS00305 S8 family serine peptidase + insig.
LRK55_RS00310 LRK55_RS00310 hypothetical protein + insig.
LRK55_RS00315 LRK55_RS00315 ISL3 family transposase - no data
LRK55_RS00320 LRK55_RS00320 hypothetical protein - cofit
LRK55_RS00325 LRK55_RS00325 type I restriction endonuclease - strong
LRK55_RS00330 LRK55_RS00330 hypothetical protein - cofit
LRK55_RS00335 LRK55_RS00335 restriction endonuclease subunit S - cofit
LRK55_RS00340 LRK55_RS00340 class I SAM-dependent DNA methyltransferase - cofit
LRK55_RS00345 LRK55_RS00345 restriction endonuclease - insig.
LRK55_RS00350 LRK55_RS00350 HD domain-containing protein - insig.

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