Gene info for LRK55_RS00235 in Rhodanobacter denitrificans MT42

Annotation: ribonuclease R
Type 1: Protein-coding gene
Located on scaffold NZ_CP088925, - strand, nucleotides 40,928 to 43,621
See nucleotide sequence around LRK55_RS00235 or for all of scaffold NZ_CP088925

Other databases: NCBI

Nearby Genes

500 ntLRK55_RS00210 and LRK55_RS00215 are separated by 17 nucleotidesLRK55_RS00215 and LRK55_RS00220 are separated by 43 nucleotidesLRK55_RS00220 and LRK55_RS00225 are separated by 78 nucleotidesLRK55_RS00225 and LRK55_RS00230 overlap by 4 nucleotidesLRK55_RS00230 and LRK55_RS00235 overlap by 4 nucleotidesLRK55_RS00235 and LRK55_RS00240 are separated by 132 nucleotidesLRK55_RS00240 and LRK55_RS00245 are separated by 128 nucleotidesLRK55_RS00245 and LRK55_RS00250 are separated by 101 nucleotidesLRK55_RS00250 and LRK55_RS00255 are separated by 32 nucleotidesLRK55_RS00255 and LRK55_RS00260 are separated by 347 nucleotides LRK55_RS00210: LRK55_RS00210 - phosphate ABC transporter ATP-binding protein PstB, at 37,924 to 38,739 _RS00210 LRK55_RS00215: LRK55_RS00215 - phosphate signaling complex protein PhoU, at 38,757 to 39,479 _RS00215 LRK55_RS00220: LRK55_RS00220 - quaternary ammonium compound efflux SMR transporter SugE, at 39,523 to 39,840 _RS00220 LRK55_RS00225: LRK55_RS00225 - hypothetical protein, at 39,919 to 40,188 _RS00225 LRK55_RS00230: LRK55_RS00230 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 40,185 to 40,931 _RS00230 LRK55_RS00235: LRK55_RS00235 - ribonuclease R, at 40,928 to 43,621 _RS00235 LRK55_RS00240: LRK55_RS00240 - tRNA-Leu, at 43,754 to 43,840 _RS00240 LRK55_RS00245: LRK55_RS00245 - LysR family transcriptional regulator, at 43,969 to 44,835 _RS00245 LRK55_RS00250: LRK55_RS00250 - nuclear transport factor 2 family protein, at 44,937 to 45,725 _RS00250 LRK55_RS00255: LRK55_RS00255 - VOC family protein, at 45,758 to 46,174 _RS00255 LRK55_RS00260: LRK55_RS00260 - aminomethyl-transferring glycine dehydrogenase, at 46,522 to 49,389 _RS00260
Locus Name Description Strand Phenotype
LRK55_RS00210 LRK55_RS00210 phosphate ABC transporter ATP-binding protein PstB + no data
LRK55_RS00215 LRK55_RS00215 phosphate signaling complex protein PhoU + strong
LRK55_RS00220 LRK55_RS00220 quaternary ammonium compound efflux SMR transporter SugE - insig.
LRK55_RS00225 LRK55_RS00225 hypothetical protein - insig.
LRK55_RS00230 LRK55_RS00230 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB - insig.
LRK55_RS00235 LRK55_RS00235 ribonuclease R - strong
LRK55_RS00240 LRK55_RS00240 tRNA-Leu + no data
LRK55_RS00245 LRK55_RS00245 LysR family transcriptional regulator - cofit
LRK55_RS00250 LRK55_RS00250 nuclear transport factor 2 family protein + cofit
LRK55_RS00255 LRK55_RS00255 VOC family protein - cofit
LRK55_RS00260 LRK55_RS00260 aminomethyl-transferring glycine dehydrogenase + cofit

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