Gene info for LRK54_RS18105 in Rhodanobacter denitrificans FW104-10B01

Annotation: DNA oxidative demethylase AlkB
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, - strand, nucleotides 3,950,417 to 3,951,073
See nucleotide sequence around LRK54_RS18105 or for all of scaffold NZ_CP088922

Other databases: NCBI

Nearby Genes

500 ntLRK54_RS18080 and LRK54_RS18085 are separated by 24 nucleotidesLRK54_RS18085 and LRK54_RS18090 are separated by 196 nucleotidesLRK54_RS18090 and LRK54_RS18095 are separated by 9 nucleotidesLRK54_RS18095 and LRK54_RS18100 overlap by 23 nucleotidesLRK54_RS18100 and LRK54_RS18105 are separated by 0 nucleotidesLRK54_RS18105 and LRK54_RS18110 overlap by 4 nucleotidesLRK54_RS18110 and LRK54_RS18115 are separated by 182 nucleotidesLRK54_RS18115 and LRK54_RS18120 are separated by 161 nucleotidesLRK54_RS18120 and LRK54_RS18125 are separated by 118 nucleotidesLRK54_RS18125 and LRK54_RS18130 are separated by 213 nucleotides LRK54_RS18080: LRK54_RS18080 - subclass B3 metallo-beta-lactamase, at 3,946,989 to 3,947,867 _RS18080 LRK54_RS18085: LRK54_RS18085 - MBL fold metallo-hydrolase, at 3,947,892 to 3,948,815 _RS18085 LRK54_RS18090: LRK54_RS18090 - hypothetical protein, at 3,949,012 to 3,949,353 _RS18090 LRK54_RS18095: LRK54_RS18095 - DUF2231 domain-containing protein, at 3,949,363 to 3,949,791 _RS18095 LRK54_RS18100: LRK54_RS18100 - DNA-3-methyladenine glycosylase, at 3,949,769 to 3,950,416 _RS18100 LRK54_RS18105: LRK54_RS18105 - DNA oxidative demethylase AlkB, at 3,950,417 to 3,951,073 _RS18105 LRK54_RS18110: LRK54_RS18110 - 2OG-Fe(II) oxygenase, at 3,951,070 to 3,951,615 _RS18110 LRK54_RS18115: LRK54_RS18115 - bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada, at 3,951,798 to 3,952,874 _RS18115 LRK54_RS18120: LRK54_RS18120 - pirin family protein, at 3,953,036 to 3,953,737 _RS18120 LRK54_RS18125: LRK54_RS18125 - SDR family oxidoreductase, at 3,953,856 to 3,955,424 _RS18125 LRK54_RS18130: LRK54_RS18130 - hypothetical protein, at 3,955,638 to 3,956,807 _RS18130
Locus Name Description Strand Phenotype
LRK54_RS18080 LRK54_RS18080 subclass B3 metallo-beta-lactamase + insig.
LRK54_RS18085 LRK54_RS18085 MBL fold metallo-hydrolase - insig.
LRK54_RS18090 LRK54_RS18090 hypothetical protein + no data
LRK54_RS18095 LRK54_RS18095 DUF2231 domain-containing protein + insig.
LRK54_RS18100 LRK54_RS18100 DNA-3-methyladenine glycosylase - insig.
LRK54_RS18105 LRK54_RS18105 DNA oxidative demethylase AlkB - sig.
LRK54_RS18110 LRK54_RS18110 2OG-Fe(II) oxygenase - insig.
LRK54_RS18115 LRK54_RS18115 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada - insig.
LRK54_RS18120 LRK54_RS18120 pirin family protein - insig.
LRK54_RS18125 LRK54_RS18125 SDR family oxidoreductase - insig.
LRK54_RS18130 LRK54_RS18130 hypothetical protein + insig.

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