Gene info for LRK54_RS18040 in Rhodanobacter denitrificans FW104-10B01

Annotation: integration host factor subunit beta
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, + strand, nucleotides 3,939,511 to 3,939,810
See nucleotide sequence around LRK54_RS18040 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_01691

Nearby Genes

500 ntLRK54_RS18015 and LRK54_RS18020 are separated by 250 nucleotidesLRK54_RS18020 and LRK54_RS18025 are separated by 87 nucleotidesLRK54_RS18025 and LRK54_RS18030 are separated by 110 nucleotidesLRK54_RS18030 and LRK54_RS18035 are separated by 176 nucleotidesLRK54_RS18035 and LRK54_RS18040 are separated by 77 nucleotidesLRK54_RS18040 and LRK54_RS18045 are separated by 168 nucleotidesLRK54_RS18045 and LRK54_RS18050 overlap by 4 nucleotidesLRK54_RS18050 and LRK54_RS18055 are separated by 7 nucleotidesLRK54_RS18055 and LRK54_RS18060 overlap by 14 nucleotidesLRK54_RS18060 and LRK54_RS18065 overlap by 4 nucleotides LRK54_RS18015: LRK54_RS18015 - LysR family transcriptional regulator, at 3,933,267 to 3,934,178 _RS18015 LRK54_RS18020: LRK54_RS18020 - NADPH-dependent 2,4-dienoyl-CoA reductase, at 3,934,429 to 3,936,447 _RS18020 LRK54_RS18025: LRK54_RS18025 - acyl-CoA-binding protein, at 3,936,535 to 3,936,792 _RS18025 LRK54_RS18030: LRK54_RS18030 - (d)CMP kinase, at 3,936,903 to 3,937,583 _RS18030 LRK54_RS18035: LRK54_RS18035 - 30S ribosomal protein S1, at 3,937,760 to 3,939,433 _RS18035 LRK54_RS18040: LRK54_RS18040 - integration host factor subunit beta, at 3,939,511 to 3,939,810 _RS18040 LRK54_RS18045: LRK54_RS18045 - DUF1049 domain-containing protein, at 3,939,979 to 3,940,227 _RS18045 LRK54_RS18050: LRK54_RS18050 - lipopolysaccharide assembly protein LapB, at 3,940,224 to 3,941,396 _RS18050 LRK54_RS18055: LRK54_RS18055 - glycosyltransferase family 4 protein, at 3,941,404 to 3,942,426 _RS18055 LRK54_RS18060: LRK54_RS18060 - polysaccharide biosynthesis protein, at 3,942,413 to 3,944,311 _RS18060 LRK54_RS18065: LRK54_RS18065 - UTP--glucose-1-phosphate uridylyltransferase GalU, at 3,944,308 to 3,945,183 _RS18065
Locus Name Description Strand Phenotype
LRK54_RS18015 LRK54_RS18015 LysR family transcriptional regulator - strong
LRK54_RS18020 LRK54_RS18020 NADPH-dependent 2,4-dienoyl-CoA reductase - insig.
LRK54_RS18025 LRK54_RS18025 acyl-CoA-binding protein - insig.
LRK54_RS18030 LRK54_RS18030 (d)CMP kinase + no data
LRK54_RS18035 LRK54_RS18035 30S ribosomal protein S1 + no data
LRK54_RS18040 LRK54_RS18040 integration host factor subunit beta + no data
LRK54_RS18045 LRK54_RS18045 DUF1049 domain-containing protein + no data
LRK54_RS18050 LRK54_RS18050 lipopolysaccharide assembly protein LapB + strong
LRK54_RS18055 LRK54_RS18055 glycosyltransferase family 4 protein + strong
LRK54_RS18060 LRK54_RS18060 polysaccharide biosynthesis protein + strong
LRK54_RS18065 LRK54_RS18065 UTP--glucose-1-phosphate uridylyltransferase GalU + no data

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