Gene info for LRK54_RS16940 in Rhodanobacter denitrificans FW104-10B01

Annotation: RNA polymerase sigma factor RpoE
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, + strand, nucleotides 3,705,852 to 3,706,466
See nucleotide sequence around LRK54_RS16940 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_01905

Nearby Genes

500 ntLRK54_RS16915 and LRK54_RS16920 are separated by 37 nucleotidesLRK54_RS16920 and LRK54_RS16925 are separated by 67 nucleotidesLRK54_RS16925 and LRK54_RS16930 are separated by 314 nucleotidesLRK54_RS16930 and LRK54_RS16935 are separated by 13 nucleotidesLRK54_RS16935 and LRK54_RS16940 are separated by 189 nucleotidesLRK54_RS16940 and LRK54_RS16945 are separated by 11 nucleotidesLRK54_RS16945 and LRK54_RS16950 are separated by 162 nucleotidesLRK54_RS16950 and LRK54_RS16955 are separated by 169 nucleotidesLRK54_RS16955 and LRK54_RS16960 are separated by 45 nucleotidesLRK54_RS16960 and LRK54_RS16965 are separated by 183 nucleotides LRK54_RS16915: LRK54_RS16915 - SlyX family protein, at 3,699,280 to 3,699,504 _RS16915 LRK54_RS16920: LRK54_RS16920 - DUF2058 family protein, at 3,699,542 to 3,700,123 _RS16920 LRK54_RS16925: LRK54_RS16925 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein, at 3,700,191 to 3,702,272 _RS16925 LRK54_RS16930: LRK54_RS16930 - hypothetical protein, at 3,702,587 to 3,703,081 _RS16930 LRK54_RS16935: LRK54_RS16935 - bifunctional diguanylate cyclase/phosphodiesterase, at 3,703,095 to 3,705,662 _RS16935 LRK54_RS16940: LRK54_RS16940 - RNA polymerase sigma factor RpoE, at 3,705,852 to 3,706,466 _RS16940 LRK54_RS16945: LRK54_RS16945 - sigma-E factor negative regulatory protein, at 3,706,478 to 3,707,131 _RS16945 LRK54_RS16950: LRK54_RS16950 - Do family serine endopeptidase, at 3,707,294 to 3,708,766 _RS16950 LRK54_RS16955: LRK54_RS16955 - translation elongation factor 4, at 3,708,936 to 3,710,729 _RS16955 LRK54_RS16960: LRK54_RS16960 - signal peptidase I, at 3,710,775 to 3,711,671 _RS16960 LRK54_RS16965: LRK54_RS16965 - DUF4845 domain-containing protein, at 3,711,855 to 3,712,238 _RS16965
Locus Name Description Strand Phenotype
LRK54_RS16915 LRK54_RS16915 SlyX family protein + no data
LRK54_RS16920 LRK54_RS16920 DUF2058 family protein + insig.
LRK54_RS16925 LRK54_RS16925 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein - insig.
LRK54_RS16930 LRK54_RS16930 hypothetical protein + strong
LRK54_RS16935 LRK54_RS16935 bifunctional diguanylate cyclase/phosphodiesterase + strong
LRK54_RS16940 LRK54_RS16940 RNA polymerase sigma factor RpoE + strong
LRK54_RS16945 LRK54_RS16945 sigma-E factor negative regulatory protein + strong
LRK54_RS16950 LRK54_RS16950 Do family serine endopeptidase + strong
LRK54_RS16955 LRK54_RS16955 translation elongation factor 4 + strong
LRK54_RS16960 LRK54_RS16960 signal peptidase I + no data
LRK54_RS16965 LRK54_RS16965 DUF4845 domain-containing protein + insig.

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