Gene info for LRK54_RS12885 in Rhodanobacter denitrificans FW104-10B01

Annotation: lipopolysaccharide transport periplasmic protein LptA
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, - strand, nucleotides 2,882,059 to 2,882,637
See nucleotide sequence around LRK54_RS12885 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_02707

Nearby Genes

500 ntLRK54_RS12860 and LRK54_RS12865 are separated by 4 nucleotidesLRK54_RS12865 and LRK54_RS12870 are separated by 197 nucleotidesLRK54_RS12870 and LRK54_RS12875 are separated by 150 nucleotidesLRK54_RS12875 and LRK54_RS12880 are separated by 96 nucleotidesLRK54_RS12880 and LRK54_RS12885 are separated by 3 nucleotidesLRK54_RS12885 and LRK54_RS12890 overlap by 38 nucleotidesLRK54_RS12890 and LRK54_RS12895 overlap by 4 nucleotidesLRK54_RS12895 and LRK54_RS12900 are separated by 66 nucleotidesLRK54_RS12900 and LRK54_RS12905 are separated by 204 nucleotidesLRK54_RS12905 and LRK54_RS12910 are separated by 84 nucleotides LRK54_RS12860: LRK54_RS12860 - RNase adapter RapZ, at 2,877,277 to 2,878,182 _RS12860 LRK54_RS12865: LRK54_RS12865 - HPr(Ser) kinase/phosphatase, at 2,878,187 to 2,879,104 _RS12865 LRK54_RS12870: LRK54_RS12870 - ribosome-associated translation inhibitor RaiA, at 2,879,302 to 2,879,625 _RS12870 LRK54_RS12875: LRK54_RS12875 - RNA polymerase factor sigma-54, at 2,879,776 to 2,881,239 _RS12875 LRK54_RS12880: LRK54_RS12880 - LPS export ABC transporter ATP-binding protein, at 2,881,336 to 2,882,055 _RS12880 LRK54_RS12885: LRK54_RS12885 - lipopolysaccharide transport periplasmic protein LptA, at 2,882,059 to 2,882,637 _RS12885 LRK54_RS12890: LRK54_RS12890 - LPS export ABC transporter periplasmic protein LptC, at 2,882,600 to 2,883,196 _RS12890 LRK54_RS12895: LRK54_RS12895 - HAD hydrolase family protein, at 2,883,193 to 2,883,741 _RS12895 LRK54_RS12900: LRK54_RS12900 - KpsF/GutQ family sugar-phosphate isomerase, at 2,883,808 to 2,884,818 _RS12900 LRK54_RS12905: LRK54_RS12905 - BolA/IbaG family iron-sulfur metabolism protein, at 2,885,023 to 2,885,262 _RS12905 LRK54_RS12910: LRK54_RS12910 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 2,885,347 to 2,886,606 _RS12910
Locus Name Description Strand Phenotype
LRK54_RS12860 LRK54_RS12860 RNase adapter RapZ - strong
LRK54_RS12865 LRK54_RS12865 HPr(Ser) kinase/phosphatase - strong
LRK54_RS12870 LRK54_RS12870 ribosome-associated translation inhibitor RaiA - strong
LRK54_RS12875 LRK54_RS12875 RNA polymerase factor sigma-54 - strong
LRK54_RS12880 LRK54_RS12880 LPS export ABC transporter ATP-binding protein - no data
LRK54_RS12885 LRK54_RS12885 lipopolysaccharide transport periplasmic protein LptA - no data
LRK54_RS12890 LRK54_RS12890 LPS export ABC transporter periplasmic protein LptC - no data
LRK54_RS12895 LRK54_RS12895 HAD hydrolase family protein - no data
LRK54_RS12900 LRK54_RS12900 KpsF/GutQ family sugar-phosphate isomerase - no data
LRK54_RS12905 LRK54_RS12905 BolA/IbaG family iron-sulfur metabolism protein + sig.
LRK54_RS12910 LRK54_RS12910 UDP-N-acetylglucosamine 1-carboxyvinyltransferase + no data

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