Gene info for LRK54_RS12640 in Rhodanobacter denitrificans FW104-10B01

Annotation: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, + strand, nucleotides 2,821,815 to 2,823,188
See nucleotide sequence around LRK54_RS12640 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_02753

Nearby Genes

500 ntLRK54_RS12615 and LRK54_RS12620 are separated by 215 nucleotidesLRK54_RS12620 and LRK54_RS12625 are separated by 325 nucleotidesLRK54_RS12625 and LRK54_RS12630 are separated by 85 nucleotidesLRK54_RS12630 and LRK54_RS12635 overlap by 4 nucleotidesLRK54_RS12635 and LRK54_RS12640 overlap by 1 nucleotidesLRK54_RS12640 and LRK54_RS12645 are separated by 212 nucleotidesLRK54_RS12645 and LRK54_RS12650 are separated by 132 nucleotidesLRK54_RS12650 and LRK54_RS12655 are separated by 103 nucleotidesLRK54_RS12655 and LRK54_RS12660 are separated by 104 nucleotidesLRK54_RS12660 and LRK54_RS12665 are separated by 212 nucleotides LRK54_RS12615: LRK54_RS12615 - outer membrane beta-barrel protein, at 2,814,697 to 2,815,368 _RS12615 LRK54_RS12620: LRK54_RS12620 - fumarate hydratase, at 2,815,584 to 2,817,101 _RS12620 LRK54_RS12625: LRK54_RS12625 - bifunctional aspartate kinase/diaminopimelate decarboxylase, at 2,817,427 to 2,819,988 _RS12625 LRK54_RS12630: LRK54_RS12630 - endonuclease domain-containing protein, at 2,820,074 to 2,820,478 _RS12630 LRK54_RS12635: LRK54_RS12635 - hypothetical protein, at 2,820,475 to 2,821,815 _RS12635 LRK54_RS12640: LRK54_RS12640 - UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase, at 2,821,815 to 2,823,188 _RS12640 LRK54_RS12645: LRK54_RS12645 - AbrB/MazE/SpoVT family DNA-binding domain-containing protein, at 2,823,401 to 2,823,514 _RS12645 LRK54_RS12650: LRK54_RS12650 - DUF1801 domain-containing protein, at 2,823,647 to 2,824,057 _RS12650 LRK54_RS12655: LRK54_RS12655 - M13 family metallopeptidase, at 2,824,161 to 2,826,212 _RS12655 LRK54_RS12660: LRK54_RS12660 - translocation/assembly module TamB domain-containing protein, at 2,826,317 to 2,830,075 _RS12660 LRK54_RS12665: LRK54_RS12665 - autotransporter assembly complex protein TamA, at 2,830,288 to 2,832,060 _RS12665
Locus Name Description Strand Phenotype
LRK54_RS12615 LRK54_RS12615 outer membrane beta-barrel protein + insig.
LRK54_RS12620 LRK54_RS12620 fumarate hydratase + sig.
LRK54_RS12625 LRK54_RS12625 bifunctional aspartate kinase/diaminopimelate decarboxylase + strong
LRK54_RS12630 LRK54_RS12630 endonuclease domain-containing protein + insig.
LRK54_RS12635 LRK54_RS12635 hypothetical protein + no data
LRK54_RS12640 LRK54_RS12640 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase + no data
LRK54_RS12645 LRK54_RS12645 AbrB/MazE/SpoVT family DNA-binding domain-containing protein - no data
LRK54_RS12650 LRK54_RS12650 DUF1801 domain-containing protein + insig.
LRK54_RS12655 LRK54_RS12655 M13 family metallopeptidase - insig.
LRK54_RS12660 LRK54_RS12660 translocation/assembly module TamB domain-containing protein - sig.
LRK54_RS12665 LRK54_RS12665 autotransporter assembly complex protein TamA - sig.

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