Gene info for LRK54_RS10135 in Rhodanobacter denitrificans FW104-10B01

Annotation: peptide deformylase
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, - strand, nucleotides 2,227,844 to 2,228,353
See nucleotide sequence around LRK54_RS10135 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_03252

Nearby Genes

500 ntLRK54_RS10110 and LRK54_RS10115 are separated by 8 nucleotidesLRK54_RS10115 and LRK54_RS10120 are separated by 157 nucleotidesLRK54_RS10120 and LRK54_RS10125 are separated by 78 nucleotidesLRK54_RS10125 and LRK54_RS10130 overlap by 1 nucleotidesLRK54_RS10130 and LRK54_RS10135 are separated by 11 nucleotidesLRK54_RS10135 and LRK54_RS10140 are separated by 189 nucleotidesLRK54_RS10140 and LRK54_RS10145 are separated by 92 nucleotidesLRK54_RS10145 and LRK54_RS10150 are separated by 121 nucleotidesLRK54_RS10150 and LRK54_RS10155 are separated by 0 nucleotidesLRK54_RS10155 and LRK54_RS10160 are separated by 181 nucleotides LRK54_RS10110: LRK54_RS10110 - glycosyltransferase, at 2,221,390 to 2,222,391 _RS10110 LRK54_RS10115: LRK54_RS10115 - O-antigen ligase family protein, at 2,222,400 to 2,223,650 _RS10115 LRK54_RS10120: LRK54_RS10120 - glycosyltransferase family 39 protein, at 2,223,808 to 2,225,529 _RS10120 LRK54_RS10125: LRK54_RS10125 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 2,225,608 to 2,226,909 _RS10125 LRK54_RS10130: LRK54_RS10130 - methionyl-tRNA formyltransferase, at 2,226,909 to 2,227,832 _RS10130 LRK54_RS10135: LRK54_RS10135 - peptide deformylase, at 2,227,844 to 2,228,353 _RS10135 LRK54_RS10140: LRK54_RS10140 - LysM peptidoglycan-binding domain-containing protein, at 2,228,543 to 2,229,664 _RS10140 LRK54_RS10145: LRK54_RS10145 - DNA-processing protein DprA, at 2,229,757 to 2,230,932 _RS10145 LRK54_RS10150: LRK54_RS10150 - DNA topoisomerase I, at 2,231,054 to 2,233,555 _RS10150 LRK54_RS10155: LRK54_RS10155 - Sua5/YciO/YrdC/YwlC family protein, at 2,233,556 to 2,234,128 _RS10155 LRK54_RS10160: LRK54_RS10160 - AMP-binding protein, at 2,234,310 to 2,235,644 _RS10160
Locus Name Description Strand Phenotype
LRK54_RS10110 LRK54_RS10110 glycosyltransferase - cofit
LRK54_RS10115 LRK54_RS10115 O-antigen ligase family protein - cofit
LRK54_RS10120 LRK54_RS10120 glycosyltransferase family 39 protein - strong
LRK54_RS10125 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB - cofit
LRK54_RS10130 LRK54_RS10130 methionyl-tRNA formyltransferase - no data
LRK54_RS10135 LRK54_RS10135 peptide deformylase - no data
LRK54_RS10140 LRK54_RS10140 LysM peptidoglycan-binding domain-containing protein + insig.
LRK54_RS10145 LRK54_RS10145 DNA-processing protein DprA + sig.
LRK54_RS10150 LRK54_RS10150 DNA topoisomerase I + strong
LRK54_RS10155 LRK54_RS10155 Sua5/YciO/YrdC/YwlC family protein + no data
LRK54_RS10160 LRK54_RS10160 AMP-binding protein + strong

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