Gene info for LRK54_RS09960 in Rhodanobacter denitrificans FW104-10B01

Annotation: type II secretion system ATPase GspE
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, + strand, nucleotides 2,186,926 to 2,188,659
See nucleotide sequence around LRK54_RS09960 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_03286

Nearby Genes

500 ntLRK54_RS09935 and LRK54_RS09940 are separated by 87 nucleotidesLRK54_RS09940 and LRK54_RS09945 are separated by 76 nucleotidesLRK54_RS09945 and LRK54_RS09950 are separated by 13 nucleotidesLRK54_RS09950 and LRK54_RS09955 are separated by 59 nucleotidesLRK54_RS09955 and LRK54_RS09960 are separated by 303 nucleotidesLRK54_RS09960 and LRK54_RS09965 are separated by 1 nucleotidesLRK54_RS09965 and LRK54_RS09970 are separated by 31 nucleotidesLRK54_RS09970 and LRK54_RS09975 are separated by 43 nucleotidesLRK54_RS09975 and LRK54_RS09980 overlap by 4 nucleotidesLRK54_RS09980 and LRK54_RS09985 overlap by 4 nucleotides LRK54_RS09935: LRK54_RS09935 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 2,182,350 to 2,183,462 _RS09935 LRK54_RS09940: LRK54_RS09940 - NYN domain-containing protein, at 2,183,550 to 2,184,212 _RS09940 LRK54_RS09945: LRK54_RS09945 - class I SAM-dependent methyltransferase, at 2,184,289 to 2,185,224 _RS09945 LRK54_RS09950: LRK54_RS09950 - pseudouridine synthase, at 2,185,238 to 2,185,774 _RS09950 LRK54_RS09955: LRK54_RS09955 - TatD family hydrolase, at 2,185,834 to 2,186,622 _RS09955 LRK54_RS09960: LRK54_RS09960 - type II secretion system ATPase GspE, at 2,186,926 to 2,188,659 _RS09960 LRK54_RS09965: LRK54_RS09965 - type II secretion system inner membrane protein GspF, at 2,188,661 to 2,189,878 _RS09965 LRK54_RS09970: LRK54_RS09970 - type II secretion system major pseudopilin GspG, at 2,189,910 to 2,190,335 _RS09970 LRK54_RS09975: LRK54_RS09975 - GspH/FimT family pseudopilin, at 2,190,379 to 2,190,798 _RS09975 LRK54_RS09980: LRK54_RS09980 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 2,190,795 to 2,191,217 _RS09980 LRK54_RS09985: LRK54_RS09985 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 2,191,214 to 2,191,870 _RS09985
Locus Name Description Strand Phenotype
LRK54_RS09935 LRK54_RS09935 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase + insig.
LRK54_RS09940 LRK54_RS09940 NYN domain-containing protein + insig.
LRK54_RS09945 LRK54_RS09945 class I SAM-dependent methyltransferase + strong
LRK54_RS09950 LRK54_RS09950 pseudouridine synthase + insig.
LRK54_RS09955 LRK54_RS09955 TatD family hydrolase - sig.
LRK54_RS09960 LRK54_RS09960 type II secretion system ATPase GspE + insig.
LRK54_RS09965 LRK54_RS09965 type II secretion system inner membrane protein GspF + insig.
LRK54_RS09970 LRK54_RS09970 type II secretion system major pseudopilin GspG + insig.
LRK54_RS09975 LRK54_RS09975 GspH/FimT family pseudopilin + insig.
LRK54_RS09980 LRK54_RS09980 prepilin-type N-terminal cleavage/methylation domain-containing protein + insig.
LRK54_RS09985 LRK54_RS09985 prepilin-type N-terminal cleavage/methylation domain-containing protein + insig.

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