Gene info for LRK54_RS09900 in Rhodanobacter denitrificans FW104-10B01

Annotation: type I-U CRISPR-associated RAMP protein Csb1/Cas7u
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, - strand, nucleotides 2,171,260 to 2,172,474
See nucleotide sequence around LRK54_RS09900 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_03298

Nearby Genes

500 ntLRK54_RS09875 and LRK54_RS09880 overlap by 4 nucleotidesLRK54_RS09880 and LRK54_RS09885 are separated by 318 nucleotidesLRK54_RS09885 and LRK54_RS09890 overlap by 11 nucleotidesLRK54_RS09890 and LRK54_RS09895 overlap by 4 nucleotidesLRK54_RS09895 and LRK54_RS09900 overlap by 1 nucleotidesLRK54_RS09900 and LRK54_RS09905 are separated by 571 nucleotidesLRK54_RS09905 and LRK54_RS09910 are separated by 143 nucleotidesLRK54_RS09910 and LRK54_RS09915 are separated by 127 nucleotidesLRK54_RS09915 and LRK54_RS09920 are separated by 88 nucleotidesLRK54_RS09920 and LRK54_RS09925 are separated by 104 nucleotides LRK54_RS09875: LRK54_RS09875 - type II toxin-antitoxin system HipA family toxin, at 2,163,825 to 2,165,081 _RS09875 LRK54_RS09880: LRK54_RS09880 - helix-turn-helix domain-containing protein, at 2,165,078 to 2,165,392 _RS09880 LRK54_RS09885: LRK54_RS09885 - hypothetical protein, at 2,165,711 to 2,166,652 _RS09885 LRK54_RS09890: LRK54_RS09890 - type I-U CRISPR-associated helicase/endonuclease Cas3, at 2,166,642 to 2,169,623 _RS09890 LRK54_RS09895: LRK54_RS09895 - type I-U CRISPR-associated protein Csb2, at 2,169,620 to 2,171,260 _RS09895 LRK54_RS09900: LRK54_RS09900 - type I-U CRISPR-associated RAMP protein Csb1/Cas7u, at 2,171,260 to 2,172,474 _RS09900 LRK54_RS09905: LRK54_RS09905 - DEAD/DEAH box helicase, at 2,173,046 to 2,176,399 _RS09905 LRK54_RS09910: LRK54_RS09910 - NADP-dependent isocitrate dehydrogenase, at 2,176,543 to 2,178,768 _RS09910 LRK54_RS09915: LRK54_RS09915 - TraB/GumN family protein, at 2,178,896 to 2,179,918 _RS09915 LRK54_RS09920: LRK54_RS09920 - aldo/keto reductase, at 2,180,007 to 2,180,951 _RS09920 LRK54_RS09925: LRK54_RS09925 - hypothetical protein, at 2,181,056 to 2,181,253 _RS09925
Locus Name Description Strand Phenotype
LRK54_RS09875 LRK54_RS09875 type II toxin-antitoxin system HipA family toxin - insig.
LRK54_RS09880 LRK54_RS09880 helix-turn-helix domain-containing protein - no data
LRK54_RS09885 LRK54_RS09885 hypothetical protein - insig.
LRK54_RS09890 LRK54_RS09890 type I-U CRISPR-associated helicase/endonuclease Cas3 - insig.
LRK54_RS09895 LRK54_RS09895 type I-U CRISPR-associated protein Csb2 - insig.
LRK54_RS09900 LRK54_RS09900 type I-U CRISPR-associated RAMP protein Csb1/Cas7u - insig.
LRK54_RS09905 LRK54_RS09905 DEAD/DEAH box helicase - insig.
LRK54_RS09910 LRK54_RS09910 NADP-dependent isocitrate dehydrogenase + strong
LRK54_RS09915 LRK54_RS09915 TraB/GumN family protein + insig.
LRK54_RS09920 LRK54_RS09920 aldo/keto reductase - insig.
LRK54_RS09925 LRK54_RS09925 hypothetical protein - no data

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