Gene info for LRK54_RS09865 in Rhodanobacter denitrificans FW104-10B01

Annotation: CRISPR-associated endonuclease Cas2
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, - strand, nucleotides 2,161,693 to 2,161,983
See nucleotide sequence around LRK54_RS09865 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_03306

Nearby Genes

500 ntLRK54_RS09840 and LRK54_RS09845 are separated by 103 nucleotidesLRK54_RS09845 and LRK54_RS09850 are separated by 214 nucleotidesLRK54_RS09850 and LRK54_RS09855 are separated by 111 nucleotidesLRK54_RS09855 and LRK54_RS09860 are separated by 16 nucleotidesLRK54_RS09860 and LRK54_RS09865 are separated by 6215 nucleotidesLRK54_RS09865 and LRK54_RS09870 are separated by 25 nucleotidesLRK54_RS09870 and LRK54_RS09875 are separated by 94 nucleotidesLRK54_RS09875 and LRK54_RS09880 overlap by 4 nucleotidesLRK54_RS09880 and LRK54_RS09885 are separated by 318 nucleotidesLRK54_RS09885 and LRK54_RS09890 overlap by 11 nucleotides LRK54_RS09840: LRK54_RS09840 - efflux RND transporter periplasmic adaptor subunit, at 2,146,586 to 2,147,827 _RS09840 LRK54_RS09845: LRK54_RS09845 - efflux RND transporter permease subunit, at 2,147,931 to 2,151,170 _RS09845 LRK54_RS09850: LRK54_RS09850 - efflux RND transporter permease subunit, at 2,151,385 to 2,154,519 _RS09850 LRK54_RS09855: LRK54_RS09855 - LysM peptidoglycan-binding domain-containing protein, at 2,154,631 to 2,154,927 _RS09855 LRK54_RS09860: LRK54_RS09860 - hypothetical protein, at 2,154,944 to 2,155,477 _RS09860 LRK54_RS09865: LRK54_RS09865 - CRISPR-associated endonuclease Cas2, at 2,161,693 to 2,161,983 _RS09865 LRK54_RS09870: LRK54_RS09870 - CRISPR-associated endonuclease Cas4/Cas1, at 2,162,009 to 2,163,730 _RS09870 LRK54_RS09875: LRK54_RS09875 - type II toxin-antitoxin system HipA family toxin, at 2,163,825 to 2,165,081 _RS09875 LRK54_RS09880: LRK54_RS09880 - helix-turn-helix domain-containing protein, at 2,165,078 to 2,165,392 _RS09880 LRK54_RS09885: LRK54_RS09885 - hypothetical protein, at 2,165,711 to 2,166,652 _RS09885 LRK54_RS09890: LRK54_RS09890 - type I-U CRISPR-associated helicase/endonuclease Cas3, at 2,166,642 to 2,169,623 _RS09890
Locus Name Description Strand Phenotype
LRK54_RS09840 LRK54_RS09840 efflux RND transporter periplasmic adaptor subunit + cofit
LRK54_RS09845 LRK54_RS09845 efflux RND transporter permease subunit + strong
LRK54_RS09850 LRK54_RS09850 efflux RND transporter permease subunit + insig.
LRK54_RS09855 LRK54_RS09855 LysM peptidoglycan-binding domain-containing protein + insig.
LRK54_RS09860 LRK54_RS09860 hypothetical protein + insig.
LRK54_RS09865 LRK54_RS09865 CRISPR-associated endonuclease Cas2 - sig.
LRK54_RS09870 LRK54_RS09870 CRISPR-associated endonuclease Cas4/Cas1 - insig.
LRK54_RS09875 LRK54_RS09875 type II toxin-antitoxin system HipA family toxin - insig.
LRK54_RS09880 LRK54_RS09880 helix-turn-helix domain-containing protein - no data
LRK54_RS09885 LRK54_RS09885 hypothetical protein - insig.
LRK54_RS09890 LRK54_RS09890 type I-U CRISPR-associated helicase/endonuclease Cas3 - insig.

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