Gene info for LRK54_RS07025 in Rhodanobacter denitrificans FW104-10B01

Annotation: pseudouridine synthase
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, + strand, nucleotides 1,506,801 to 1,507,520
See nucleotide sequence around LRK54_RS07025 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_00292

Nearby Genes

500 ntLRK54_RS07000 and LRK54_RS07005 are separated by 30 nucleotidesLRK54_RS07005 and LRK54_RS07010 are separated by 294 nucleotidesLRK54_RS07010 and LRK54_RS07015 are separated by 94 nucleotidesLRK54_RS07015 and LRK54_RS07020 overlap by 4 nucleotidesLRK54_RS07020 and LRK54_RS07025 are separated by 94 nucleotidesLRK54_RS07025 and LRK54_RS07030 are separated by 114 nucleotidesLRK54_RS07030 and LRK54_RS07035 are separated by 67 nucleotidesLRK54_RS07035 and LRK54_RS07040 are separated by 187 nucleotidesLRK54_RS07040 and LRK54_RS07045 overlap by 23 nucleotidesLRK54_RS07045 and LRK54_RS07050 are separated by 148 nucleotides LRK54_RS07000: LRK54_RS07000 - spore coat U domain-containing protein, at 1,502,192 to 1,503,232 _RS07000 LRK54_RS07005: LRK54_RS07005 - spore coat protein U domain-containing protein, at 1,503,263 to 1,503,811 _RS07005 LRK54_RS07010: LRK54_RS07010 - FAD-binding oxidoreductase, at 1,504,106 to 1,504,867 _RS07010 LRK54_RS07015: LRK54_RS07015 - ABC transporter ATP-binding protein, at 1,504,962 to 1,505,927 _RS07015 LRK54_RS07020: LRK54_RS07020 - ABC transporter permease, at 1,505,924 to 1,506,706 _RS07020 LRK54_RS07025: LRK54_RS07025 - pseudouridine synthase, at 1,506,801 to 1,507,520 _RS07025 LRK54_RS07030: LRK54_RS07030 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 1,507,635 to 1,508,684 _RS07030 LRK54_RS07035: LRK54_RS07035 - 30S ribosomal protein S21, at 1,508,752 to 1,508,967 _RS07035 LRK54_RS07040: LRK54_RS07040 - GatB/YqeY domain-containing protein, at 1,509,155 to 1,509,601 _RS07040 LRK54_RS07045: LRK54_RS07045 - hypothetical protein, at 1,509,579 to 1,509,893 _RS07045 LRK54_RS07050: LRK54_RS07050 - DUF1328 domain-containing protein, at 1,510,042 to 1,510,212 _RS07050
Locus Name Description Strand Phenotype
LRK54_RS07000 LRK54_RS07000 spore coat U domain-containing protein + cofit
LRK54_RS07005 LRK54_RS07005 spore coat protein U domain-containing protein - strong
LRK54_RS07010 LRK54_RS07010 FAD-binding oxidoreductase - insig.
LRK54_RS07015 LRK54_RS07015 ABC transporter ATP-binding protein + no data
LRK54_RS07020 LRK54_RS07020 ABC transporter permease + strong
LRK54_RS07025 LRK54_RS07025 pseudouridine synthase + insig.
LRK54_RS07030 LRK54_RS07030 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD - no data
LRK54_RS07035 LRK54_RS07035 30S ribosomal protein S21 + no data
LRK54_RS07040 LRK54_RS07040 GatB/YqeY domain-containing protein + insig.
LRK54_RS07045 LRK54_RS07045 hypothetical protein - insig.
LRK54_RS07050 LRK54_RS07050 DUF1328 domain-containing protein + no data

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