Gene info for LRK54_RS04320 in Rhodanobacter denitrificans FW104-10B01

Annotation: uroporphyrinogen decarboxylase
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, + strand, nucleotides 912,026 to 913,096
See nucleotide sequence around LRK54_RS04320 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_00830

Nearby Genes

500 ntLRK54_RS04295 and LRK54_RS04300 are separated by 24 nucleotidesLRK54_RS04300 and LRK54_RS04305 are separated by 53 nucleotidesLRK54_RS04305 and LRK54_RS04310 overlap by 4 nucleotidesLRK54_RS04310 and LRK54_RS04315 are separated by 108 nucleotidesLRK54_RS04315 and LRK54_RS04320 are separated by 5 nucleotidesLRK54_RS04320 and LRK54_RS04325 are separated by 15 nucleotidesLRK54_RS04325 and LRK54_RS04330 are separated by 103 nucleotidesLRK54_RS04330 and LRK54_RS04335 are separated by 79 nucleotidesLRK54_RS04335 and LRK54_RS04340 are separated by 98 nucleotidesLRK54_RS04340 and LRK54_RS04345 are separated by 5 nucleotides LRK54_RS04295: LRK54_RS04295 - YbjQ family protein, at 908,753 to 909,097 _RS04295 LRK54_RS04300: LRK54_RS04300 - SDR family oxidoreductase, at 909,122 to 909,955 _RS04300 LRK54_RS04305: LRK54_RS04305 - shikimate kinase, at 910,009 to 910,563 _RS04305 LRK54_RS04310: LRK54_RS04310 - 3-dehydroquinate synthase, at 910,560 to 911,651 _RS04310 LRK54_RS04315: LRK54_RS04315 - WGR domain-containing protein, at 911,760 to 912,020 _RS04315 LRK54_RS04320: LRK54_RS04320 - uroporphyrinogen decarboxylase, at 912,026 to 913,096 _RS04320 LRK54_RS04325: LRK54_RS04325 - DUF3147 family protein, at 913,112 to 913,465 _RS04325 LRK54_RS04330: LRK54_RS04330 - valine--tRNA ligase, at 913,569 to 916,397 _RS04330 LRK54_RS04335: LRK54_RS04335 - class I SAM-dependent methyltransferase, at 916,477 to 917,163 _RS04335 LRK54_RS04340: LRK54_RS04340 - ribosomal protein S18-alanine N-acetyltransferase, at 917,262 to 917,732 _RS04340 LRK54_RS04345: LRK54_RS04345 - hypothetical protein, at 917,738 to 918,238 _RS04345
Locus Name Description Strand Phenotype
LRK54_RS04295 LRK54_RS04295 YbjQ family protein - insig.
LRK54_RS04300 LRK54_RS04300 SDR family oxidoreductase - insig.
LRK54_RS04305 LRK54_RS04305 shikimate kinase + cofit
LRK54_RS04310 LRK54_RS04310 3-dehydroquinate synthase + no data
LRK54_RS04315 LRK54_RS04315 WGR domain-containing protein + insig.
LRK54_RS04320 LRK54_RS04320 uroporphyrinogen decarboxylase + no data
LRK54_RS04325 LRK54_RS04325 DUF3147 family protein + sig.
LRK54_RS04330 LRK54_RS04330 valine--tRNA ligase + no data
LRK54_RS04335 LRK54_RS04335 class I SAM-dependent methyltransferase - insig.
LRK54_RS04340 LRK54_RS04340 ribosomal protein S18-alanine N-acetyltransferase - strong
LRK54_RS04345 LRK54_RS04345 hypothetical protein - no data

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