Gene info for LRK54_RS00565 in Rhodanobacter denitrificans FW104-10B01

Annotation: RNA polymerase sigma factor
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, - strand, nucleotides 117,422 to 117,913
See nucleotide sequence around LRK54_RS00565 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_01563

Nearby Genes

500 ntLRK54_RS00540 and LRK54_RS00545 are separated by 159 nucleotidesLRK54_RS00545 and LRK54_RS00550 overlap by 4 nucleotidesLRK54_RS00550 and LRK54_RS00555 are separated by 65 nucleotidesLRK54_RS00555 and LRK54_RS00560 are separated by 52 nucleotidesLRK54_RS00560 and LRK54_RS00565 overlap by 4 nucleotidesLRK54_RS00565 and LRK54_RS00570 are separated by 121 nucleotidesLRK54_RS00570 and LRK54_RS00575 are separated by 106 nucleotidesLRK54_RS00575 and LRK54_RS00580 are separated by 303 nucleotidesLRK54_RS00580 and LRK54_RS00585 are separated by 128 nucleotidesLRK54_RS00585 and LRK54_RS00590 overlap by 1 nucleotides LRK54_RS00540: LRK54_RS00540 - hypothetical protein, at 113,950 to 114,114 _RS00540 LRK54_RS00545: LRK54_RS00545 - histidine kinase, at 114,274 to 115,575 _RS00545 LRK54_RS00550: LRK54_RS00550 - LytTR family DNA-binding domain-containing protein, at 115,572 to 116,342 _RS00550 LRK54_RS00555: LRK54_RS00555 - hypothetical protein, at 116,408 to 116,626 _RS00555 LRK54_RS00560: LRK54_RS00560 - hypothetical protein, at 116,679 to 117,425 _RS00560 LRK54_RS00565: LRK54_RS00565 - RNA polymerase sigma factor, at 117,422 to 117,913 _RS00565 LRK54_RS00570: LRK54_RS00570 - S8 family serine peptidase, at 118,035 to 119,282 _RS00570 LRK54_RS00575: LRK54_RS00575 - hypothetical protein, at 119,389 to 120,435 _RS00575 LRK54_RS00580: LRK54_RS00580 - HD domain-containing protein, at 120,739 to 121,083 _RS00580 LRK54_RS00585: LRK54_RS00585 - alanine racemase, at 121,212 to 122,285 _RS00585 LRK54_RS00590: LRK54_RS00590 - D-amino acid dehydrogenase, at 122,285 to 123,565 _RS00590
Locus Name Description Strand Phenotype
LRK54_RS00540 LRK54_RS00540 hypothetical protein - no data
LRK54_RS00545 LRK54_RS00545 histidine kinase + insig.
LRK54_RS00550 LRK54_RS00550 LytTR family DNA-binding domain-containing protein + insig.
LRK54_RS00555 LRK54_RS00555 hypothetical protein + insig.
LRK54_RS00560 LRK54_RS00560 hypothetical protein - strong
LRK54_RS00565 LRK54_RS00565 RNA polymerase sigma factor - insig.
LRK54_RS00570 LRK54_RS00570 S8 family serine peptidase + insig.
LRK54_RS00575 LRK54_RS00575 hypothetical protein + insig.
LRK54_RS00580 LRK54_RS00580 HD domain-containing protein - insig.
LRK54_RS00585 LRK54_RS00585 alanine racemase - no data
LRK54_RS00590 LRK54_RS00590 D-amino acid dehydrogenase - sig.

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