Gene info for LRK54_RS00225 in Rhodanobacter denitrificans FW104-10B01

Annotation: UdgX family uracil-DNA binding protein
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_CP088922, + strand, nucleotides 51,865 to 52,378
See nucleotide sequence around LRK54_RS00225 or for all of scaffold NZ_CP088922

Nearby Genes

500 ntLRK54_RS00200 and LRK54_RS00205 are separated by 105 nucleotidesLRK54_RS00205 and LRK54_RS00210 are separated by 144 nucleotidesLRK54_RS00210 and LRK54_RS00215 are separated by 53 nucleotidesLRK54_RS00215 and LRK54_RS00220 are separated by 298 nucleotidesLRK54_RS00220 and LRK54_RS00225 are separated by 162 nucleotidesLRK54_RS00225 and LRK54_RS00230 are separated by 13 nucleotidesLRK54_RS00230 and LRK54_RS00235 are separated by 51 nucleotidesLRK54_RS00235 and LRK54_RS00240 overlap by 4 nucleotidesLRK54_RS00240 and LRK54_RS00245 are separated by 12 nucleotidesLRK54_RS00245 and LRK54_RS00250 overlap by 1 nucleotides LRK54_RS00200: LRK54_RS00200 - site-specific integrase, at 48,250 to 49,335 _RS00200 LRK54_RS00205: LRK54_RS00205 - DNA-binding protein, at 49,441 to 50,331 _RS00205 LRK54_RS00210: LRK54_RS00210 - cyclin-dependent kinase inhibitor 3 family protein, at 50,476 to 50,940 _RS00210 LRK54_RS00215: LRK54_RS00215 - hypothetical protein, at 50,994 to 51,251 _RS00215 LRK54_RS00220: LRK54_RS00220 - DUF3309 domain-containing protein, at 51,550 to 51,702 _RS00220 LRK54_RS00225: LRK54_RS00225 - UdgX family uracil-DNA binding protein, at 51,865 to 52,378 _RS00225 LRK54_RS00230: LRK54_RS00230 - DNA topoisomerase IB, at 52,392 to 52,661 _RS00230 LRK54_RS00235: LRK54_RS00235 - error-prone DNA polymerase, at 52,713 to 55,793 _RS00235 LRK54_RS00240: LRK54_RS00240 - DNA polymerase Y family protein, at 55,790 to 57,193 _RS00240 LRK54_RS00245: LRK54_RS00245 - translesion DNA synthesis-associated protein ImuA, at 57,206 to 57,829 _RS00245 LRK54_RS00250: LRK54_RS00250 - transcriptional repressor LexA, at 57,829 to 58,449 _RS00250
Locus Name Description Strand Phenotype
LRK54_RS00200 LRK54_RS00200 site-specific integrase - insig.
LRK54_RS00205 LRK54_RS00205 DNA-binding protein + insig.
LRK54_RS00210 LRK54_RS00210 cyclin-dependent kinase inhibitor 3 family protein + insig.
LRK54_RS00215 LRK54_RS00215 hypothetical protein + insig.
LRK54_RS00220 LRK54_RS00220 DUF3309 domain-containing protein + insig.
LRK54_RS00225 LRK54_RS00225 UdgX family uracil-DNA binding protein + insig.
LRK54_RS00230 LRK54_RS00230 DNA topoisomerase IB - insig.
LRK54_RS00235 LRK54_RS00235 error-prone DNA polymerase - insig.
LRK54_RS00240 LRK54_RS00240 DNA polymerase Y family protein - insig.
LRK54_RS00245 LRK54_RS00245 translesion DNA synthesis-associated protein ImuA - insig.
LRK54_RS00250 LRK54_RS00250 transcriptional repressor LexA - insig.

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