Gene info for LRK54_RS00085 in Rhodanobacter denitrificans FW104-10B01

Annotation: tetratricopeptide repeat protein
Type 1: Protein-coding gene
Located on scaffold NZ_CP088922, + strand, nucleotides 16,412 to 17,062
See nucleotide sequence around LRK54_RS00085 or for all of scaffold NZ_CP088922

Other databases: NCBI, other: GEIEHFMP_01654

Nearby Genes

500 ntLRK54_RS00060 and LRK54_RS00065 are separated by 224 nucleotidesLRK54_RS00065 and LRK54_RS00070 are separated by 2 nucleotidesLRK54_RS00070 and LRK54_RS00075 overlap by 11 nucleotidesLRK54_RS00075 and LRK54_RS00080 overlap by 4 nucleotidesLRK54_RS00080 and LRK54_RS00085 are separated by 153 nucleotidesLRK54_RS00085 and LRK54_RS00090 are separated by 8 nucleotidesLRK54_RS00090 and LRK54_RS00095 are separated by 22 nucleotidesLRK54_RS00095 and LRK54_RS00100 are separated by 90 nucleotidesLRK54_RS00100 and LRK54_RS00105 are separated by 89 nucleotidesLRK54_RS00105 and LRK54_RS00110 are separated by 118 nucleotides LRK54_RS00060: LRK54_RS00060 - TetR/AcrR family transcriptional regulator, at 12,079 to 12,705 _RS00060 LRK54_RS00065: LRK54_RS00065 - nucleoside-diphosphate kinase, at 12,930 to 13,355 _RS00065 LRK54_RS00070: LRK54_RS00070 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 13,358 to 14,488 _RS00070 LRK54_RS00075: LRK54_RS00075 - type IV pilus biogenesis/stability protein PilW, at 14,478 to 15,266 _RS00075 LRK54_RS00080: LRK54_RS00080 - helix-turn-helix domain-containing protein, at 15,263 to 16,258 _RS00080 LRK54_RS00085: LRK54_RS00085 - tetratricopeptide repeat protein, at 16,412 to 17,062 _RS00085 LRK54_RS00090: LRK54_RS00090 - outer membrane protein assembly factor BamB, at 17,071 to 18,270 _RS00090 LRK54_RS00095: LRK54_RS00095 - ribosome biogenesis GTPase Der, at 18,293 to 19,696 _RS00095 LRK54_RS00100: LRK54_RS00100 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD, at 19,787 to 20,656 _RS00100 LRK54_RS00105: LRK54_RS00105 - IMP dehydrogenase, at 20,746 to 22,203 _RS00105 LRK54_RS00110: LRK54_RS00110 - glutamine-hydrolyzing GMP synthase, at 22,322 to 23,926 _RS00110
Locus Name Description Strand Phenotype
LRK54_RS00060 LRK54_RS00060 TetR/AcrR family transcriptional regulator - insig.
LRK54_RS00065 LRK54_RS00065 nucleoside-diphosphate kinase + no data
LRK54_RS00070 LRK54_RS00070 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN + sig.
LRK54_RS00075 LRK54_RS00075 type IV pilus biogenesis/stability protein PilW + sig.
LRK54_RS00080 LRK54_RS00080 helix-turn-helix domain-containing protein + strong
LRK54_RS00085 LRK54_RS00085 tetratricopeptide repeat protein + cofit
LRK54_RS00090 LRK54_RS00090 outer membrane protein assembly factor BamB + no data
LRK54_RS00095 LRK54_RS00095 ribosome biogenesis GTPase Der + no data
LRK54_RS00100 LRK54_RS00100 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD + no data
LRK54_RS00105 LRK54_RS00105 IMP dehydrogenase + no data
LRK54_RS00110 LRK54_RS00110 glutamine-hydrolyzing GMP synthase + no data

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