Gene info for IJEDHG_12470 in Erwinia tracheiphila HP pepo 2.2

Name: rsmB
Annotation: 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Type 1: Protein-coding gene
Located on scaffold contig_1, - strand, nucleotides 2,087,793 to 2,089,082
See nucleotide sequence around IJEDHG_12470 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntIJEDHG_12445 and IJEDHG_12450 are separated by 346 nucleotidesIJEDHG_12450 and IJEDHG_12455 overlap by 32 nucleotidesIJEDHG_12455 and IJEDHG_12460 are separated by 309 nucleotidesIJEDHG_12460 and trkA are separated by 152 nucleotidestrkA and rsmB are separated by 46 nucleotidesrsmB and fmt are separated by 47 nucleotidesfmt and def are separated by 21 nucleotidesdef and dprA are separated by 116 nucleotidesdprA and smg overlap by 29 nucleotidessmg and IJEDHG_12495 are separated by 27 nucleotides IJEDHG_12445: IJEDHG_12445 - Site-specific DNA-methyltransferase (adenine-specific), at 2,084,794 to 2,085,033 _12445 IJEDHG_12450: IJEDHG_12450 - hypothetical protein, at 2,085,380 to 2,085,577 _12450 IJEDHG_12455: IJEDHG_12455 - hypothetical protein, at 2,085,546 to 2,085,782 _12455 IJEDHG_12460: IJEDHG_12460 - hypothetical protein, at 2,086,092 to 2,086,217 _12460 IJEDHG_12465: trkA - Trk system potassium transporter TrkA, at 2,086,370 to 2,087,746 trkA IJEDHG_12470: rsmB - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 2,087,793 to 2,089,082 rsmB IJEDHG_12475: fmt - methionyl-tRNA formyltransferase, at 2,089,130 to 2,090,071 fmt IJEDHG_12480: def - peptide deformylase, at 2,090,093 to 2,090,605 def IJEDHG_12485: dprA - DNA-protecting protein DprA, at 2,090,722 to 2,091,852 dprA IJEDHG_12490: smg - DUF494 domain-containing protein, at 2,091,824 to 2,092,297 smg IJEDHG_12495: IJEDHG_12495 - topoisomerase DNA-binding C4 zinc finger domain-containing protein, at 2,092,325 to 2,092,879 _12495
Locus Name Description Strand Phenotype
IJEDHG_12445 IJEDHG_12445 Site-specific DNA-methyltransferase (adenine-specific) + no data
IJEDHG_12450 IJEDHG_12450 hypothetical protein + cofit
IJEDHG_12455 IJEDHG_12455 hypothetical protein - no data
IJEDHG_12460 IJEDHG_12460 hypothetical protein - no data
IJEDHG_12465 trkA Trk system potassium transporter TrkA - cofit
IJEDHG_12470 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB - cofit
IJEDHG_12475 fmt methionyl-tRNA formyltransferase - no data
IJEDHG_12480 def peptide deformylase - no data
IJEDHG_12485 dprA DNA-protecting protein DprA + cofit
IJEDHG_12490 smg DUF494 domain-containing protein + insig.
IJEDHG_12495 IJEDHG_12495 topoisomerase DNA-binding C4 zinc finger domain-containing protein + cofit

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