Gene info for IAI47_04115 in Pantoea sp. MT58

Annotation: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
Type 1: Protein-coding gene
Located on scaffold CP061083, + strand, nucleotides 862,588 to 863,904
See nucleotide sequence around IAI47_04115 or for all of scaffold CP061083

Other databases: NCBI

Nearby Genes

500 ntIAI47_04090 and IAI47_04095 are separated by 45 nucleotidesIAI47_04095 and IAI47_04100 are separated by 19 nucleotidesIAI47_04100 and IAI47_04105 are separated by 74 nucleotidesIAI47_04105 and IAI47_04110 are separated by 188 nucleotidesIAI47_04110 and IAI47_04115 are separated by 94 nucleotidesIAI47_04115 and IAI47_04120 are separated by 29 nucleotidesIAI47_04120 and IAI47_04125 are separated by 158 nucleotidesIAI47_04125 and IAI47_04130 are separated by 230 nucleotidesIAI47_04130 and IAI47_04135 are separated by 76 nucleotidesIAI47_04135 and IAI47_04140 are separated by 149 nucleotides IAI47_04090: IAI47_04090 - glucarate dehydratase, at 855,310 to 856,641 _04090 IAI47_04095: IAI47_04095 - 2-dehydro-3-deoxyglucarate aldolase, at 856,687 to 857,457 _04095 IAI47_04100: IAI47_04100 - 2-hydroxy-3-oxopropionate reductase, at 857,477 to 858,361 _04100 IAI47_04105: IAI47_04105 - glycerate kinase, at 858,436 to 859,575 _04105 IAI47_04110: IAI47_04110 - two-component sensor histidine kinase BarA, at 859,764 to 862,493 _04110 IAI47_04115: IAI47_04115 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 862,588 to 863,904 _04115 IAI47_04120: IAI47_04120 - GTP diphosphokinase, at 863,934 to 866,165 _04120 IAI47_04125: IAI47_04125 - nucleoside triphosphate pyrophosphohydrolase, at 866,324 to 867,112 _04125 IAI47_04130: IAI47_04130 - CTP synthase (glutamine hydrolyzing), at 867,343 to 868,980 _04130 IAI47_04135: IAI47_04135 - phosphopyruvate hydratase, at 869,057 to 870,352 _04135 IAI47_04140: IAI47_04140 - 7-carboxy-7-deazaguanine synthase QueE, at 870,502 to 871,173 _04140
Locus Name Description Strand Phenotype
IAI47_04090 IAI47_04090 glucarate dehydratase + insig.
IAI47_04095 IAI47_04095 2-dehydro-3-deoxyglucarate aldolase + insig.
IAI47_04100 IAI47_04100 2-hydroxy-3-oxopropionate reductase + insig.
IAI47_04105 IAI47_04105 glycerate kinase + strong
IAI47_04110 IAI47_04110 two-component sensor histidine kinase BarA - strong
IAI47_04115 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD + insig.
IAI47_04120 IAI47_04120 GTP diphosphokinase + strong
IAI47_04125 IAI47_04125 nucleoside triphosphate pyrophosphohydrolase + insig.
IAI47_04130 IAI47_04130 CTP synthase (glutamine hydrolyzing) + no data
IAI47_04135 IAI47_04135 phosphopyruvate hydratase + no data
IAI47_04140 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE + insig.

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