Gene info for HSERO_RS09565 in Herbaspirillum seropedicae SmR1

Updated annotation (from data): nitrite efflux transporter, HPP family
Rationale: Specifically important in stress Sodium nitrite. Related to Synpcc7942_1745, which can be a nitrite uptake transporter (PMID:24904028), but this appears to be exporting nitrite. Besides the HPP domain, it encodes two cytoplasmic CBS domains, which might have a regulatory role.
Original annotation: membrane protein
Type 1: Protein-coding gene
Located on scaffold NC_014323, + strand, nucleotides 2,175,724 to 2,176,926
See nucleotide sequence around HSERO_RS09565 or for all of scaffold NC_014323

Other databases: NCBI, uniprot: D8IS80

Nearby Genes

500 ntHSERO_RS09540 and HSERO_RS09545 are separated by 264 nucleotidesHSERO_RS09545 and HSERO_RS09550 are separated by 307 nucleotidesHSERO_RS09550 and HSERO_RS09555 are separated by 8 nucleotidesHSERO_RS09555 and HSERO_RS09560 are separated by 100 nucleotidesHSERO_RS09560 and HSERO_RS09565 are separated by 150 nucleotidesHSERO_RS09565 and HSERO_RS09570 are separated by 566 nucleotidesHSERO_RS09570 and HSERO_RS09575 overlap by 7 nucleotidesHSERO_RS09575 and HSERO_RS09580 are separated by 154 nucleotidesHSERO_RS09580 and HSERO_RS09585 are separated by 107 nucleotidesHSERO_RS09585 and HSERO_RS09590 are separated by 220 nucleotides HSERO_RS09540: HSERO_RS09540 - diguanylate cyclase, at 2,169,717 to 2,171,597 _RS09540 HSERO_RS09545: HSERO_RS09545 - tRNA-Ser, at 2,171,862 to 2,171,951 _RS09545 HSERO_RS09550: HSERO_RS09550 - diguanylate cyclase, at 2,172,259 to 2,174,016 _RS09550 HSERO_RS09555: HSERO_RS09555 - LacI family transcription regulator, at 2,174,025 to 2,175,047 _RS09555 HSERO_RS09560: HSERO_RS09560 - MarR family transcriptional regulator, at 2,175,148 to 2,175,573 _RS09560 HSERO_RS09565: HSERO_RS09565 - nitrite efflux transporter, HPP family (from data), at 2,175,724 to 2,176,926 _RS09565 HSERO_RS09570: HSERO_RS09570 - Fe-S oxidoreductase, at 2,177,493 to 2,177,711 _RS09570 HSERO_RS09575: HSERO_RS09575 - septum formation inhibitor Maf, at 2,177,705 to 2,178,340 _RS09575 HSERO_RS09580: HSERO_RS09580 - DNA-binding protein, at 2,178,495 to 2,179,028 _RS09580 HSERO_RS09585: HSERO_RS09585 - 50S ribosomal protein L32, at 2,179,136 to 2,179,318 _RS09585 HSERO_RS09590: HSERO_RS09590 - phosphate acyltransferase, at 2,179,539 to 2,180,636 _RS09590
Locus Name Description Strand Phenotype
HSERO_RS09540 HSERO_RS09540 diguanylate cyclase - insig.
HSERO_RS09545 HSERO_RS09545 tRNA-Ser + no data
HSERO_RS09550 HSERO_RS09550 diguanylate cyclase + insig.
HSERO_RS09555 HSERO_RS09555 LacI family transcription regulator - insig.
HSERO_RS09560 HSERO_RS09560 MarR family transcriptional regulator - insig.
HSERO_RS09565 HSERO_RS09565 nitrite efflux transporter, HPP family (from data) + sig.
HSERO_RS09570 HSERO_RS09570 Fe-S oxidoreductase + insig.
HSERO_RS09575 HSERO_RS09575 septum formation inhibitor Maf - insig.
HSERO_RS09580 HSERO_RS09580 DNA-binding protein + no data
HSERO_RS09585 HSERO_RS09585 50S ribosomal protein L32 + no data
HSERO_RS09590 HSERO_RS09590 phosphate acyltransferase + no data

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