Gene info for HSERO_RS05180 in Herbaspirillum seropedicae SmR1

Annotation: sugar ABC transporter permease
Type 1: Protein-coding gene
Located on scaffold NC_014323, + strand, nucleotides 1,145,304 to 1,146,383
See nucleotide sequence around HSERO_RS05180 or for all of scaffold NC_014323

Other databases: NCBI, uniprot: D8J0Z7

Nearby Genes

500 ntHSERO_RS05155 and HSERO_RS05160 are separated by 32 nucleotidesHSERO_RS05160 and HSERO_RS05165 are separated by 13 nucleotidesHSERO_RS05165 and HSERO_RS05170 are separated by 502 nucleotidesHSERO_RS05170 and HSERO_RS05175 are separated by 111 nucleotidesHSERO_RS05175 and HSERO_RS05180 overlap by 4 nucleotidesHSERO_RS05180 and HSERO_RS05185 overlap by 4 nucleotidesHSERO_RS05185 and HSERO_RS05190 are separated by 219 nucleotidesHSERO_RS05190 and HSERO_RS05195 are separated by 206 nucleotidesHSERO_RS05195 and HSERO_RS05200 are separated by 74 nucleotidesHSERO_RS05200 and HSERO_RS05205 are separated by 93 nucleotides HSERO_RS05155: HSERO_RS05155 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 1,139,550 to 1,140,188 _RS05155 HSERO_RS05160: HSERO_RS05160 - 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) (from data), at 1,140,221 to 1,141,180 _RS05160 HSERO_RS05165: HSERO_RS05165 - galactose-1-epimerase, at 1,141,194 to 1,142,168 _RS05165 HSERO_RS05170: HSERO_RS05170 - LacI family transcription regulator, at 1,142,671 to 1,143,645 _RS05170 HSERO_RS05175: HSERO_RS05175 - sugar ABC transporter ATP-binding protein, at 1,143,757 to 1,145,307 _RS05175 HSERO_RS05180: HSERO_RS05180 - sugar ABC transporter permease, at 1,145,304 to 1,146,383 _RS05180 HSERO_RS05185: HSERO_RS05185 - ABC transporter permease, at 1,146,380 to 1,147,402 _RS05185 HSERO_RS05190: HSERO_RS05190 - sugar ABC transporter substrate-binding protein, at 1,147,622 to 1,148,695 _RS05190 HSERO_RS05195: HSERO_RS05195 - xylose ABC transporter ATP-binding protein, at 1,148,902 to 1,150,458 _RS05195 HSERO_RS05200: HSERO_RS05200 - ABC transporter permease, at 1,150,533 to 1,151,750 _RS05200 HSERO_RS05205: HSERO_RS05205 - L-arabonate dehydratase (EC 4.2.1.25) (from data), at 1,151,844 to 1,153,601 _RS05205
Locus Name Description Strand Phenotype
HSERO_RS05155 HSERO_RS05155 2-dehydro-3-deoxy-6-phosphogalactonate aldolase - strong
HSERO_RS05160 HSERO_RS05160 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) (from data) - strong
HSERO_RS05165 HSERO_RS05165 galactose-1-epimerase - strong
HSERO_RS05170 HSERO_RS05170 LacI family transcription regulator + sig.
HSERO_RS05175 HSERO_RS05175 sugar ABC transporter ATP-binding protein + insig.
HSERO_RS05180 HSERO_RS05180 sugar ABC transporter permease + insig.
HSERO_RS05185 HSERO_RS05185 ABC transporter permease + insig.
HSERO_RS05190 HSERO_RS05190 sugar ABC transporter substrate-binding protein + strong
HSERO_RS05195 HSERO_RS05195 xylose ABC transporter ATP-binding protein + strong
HSERO_RS05200 HSERO_RS05200 ABC transporter permease + strong
HSERO_RS05205 HSERO_RS05205 L-arabonate dehydratase (EC 4.2.1.25) (from data) + strong

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