Gene info for HSERO_RS03650 in Herbaspirillum seropedicae SmR1

Updated annotation (from data): Mannose isomerase (EC 5.3.1.7)
Rationale: Specifically important for utilizing D-Mannose. Automated validation from mutant phenotype: the predicted function (5.3.1.7) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: N-acyl-D-glucosamine 2-epimerase
Type 1: Protein-coding gene
Located on scaffold NC_014323, + strand, nucleotides 797,158 to 798,348
See nucleotide sequence around HSERO_RS03650 or for all of scaffold NC_014323

Other databases: NCBI, uniprot: D8IZC9

Nearby Genes

500 ntHSERO_RS03625 and HSERO_RS03630 are separated by 381 nucleotidesHSERO_RS03630 and HSERO_RS03635 are separated by 62 nucleotidesHSERO_RS03635 and HSERO_RS03640 are separated by 97 nucleotidesHSERO_RS03640 and HSERO_RS03645 are separated by 79 nucleotidesHSERO_RS03645 and HSERO_RS03650 are separated by 21 nucleotidesHSERO_RS03650 and HSERO_RS03655 are separated by 43 nucleotidesHSERO_RS03655 and HSERO_RS03660 are separated by 30 nucleotidesHSERO_RS03660 and HSERO_RS03665 are separated by 4 nucleotidesHSERO_RS03665 and HSERO_RS03670 are separated by 355 nucleotidesHSERO_RS03670 and HSERO_RS03675 are separated by 98 nucleotides HSERO_RS03625: HSERO_RS03625 - nicotinamidase-like protein, at 791,814 to 792,422 _RS03625 HSERO_RS03630: HSERO_RS03630 - fructose transporter, at 792,804 to 793,421 _RS03630 HSERO_RS03635: HSERO_RS03635 - D-mannose ABC transporter, substrate-binding component (from data), at 793,484 to 794,434 _RS03635 HSERO_RS03640: HSERO_RS03640 - D-mannose ABC transporter, ATPase component (from data), at 794,532 to 796,037 _RS03640 HSERO_RS03645: HSERO_RS03645 - D-mannose ABC transporter, permease component (from data), at 796,117 to 797,136 _RS03645 HSERO_RS03650: HSERO_RS03650 - Mannose isomerase (EC 5.3.1.7) (from data), at 797,158 to 798,348 _RS03650 HSERO_RS03655: HSERO_RS03655 - ABC transporter substrate-binding protein, at 798,392 to 799,237 _RS03655 HSERO_RS03660: HSERO_RS03660 - diguanylate cyclase, at 799,268 to 800,668 _RS03660 HSERO_RS03665: HSERO_RS03665 - oxidoreductase, at 800,673 to 802,172 _RS03665 HSERO_RS03670: HSERO_RS03670 - hypothetical protein, at 802,528 to 802,962 _RS03670 HSERO_RS03675: HSERO_RS03675 - type VI secretion protein, at 803,061 to 805,925 _RS03675
Locus Name Description Strand Phenotype
HSERO_RS03625 HSERO_RS03625 nicotinamidase-like protein + sig.
HSERO_RS03630 HSERO_RS03630 fructose transporter + strong
HSERO_RS03635 HSERO_RS03635 D-mannose ABC transporter, substrate-binding component (from data) + insig.
HSERO_RS03640 HSERO_RS03640 D-mannose ABC transporter, ATPase component (from data) + strong
HSERO_RS03645 HSERO_RS03645 D-mannose ABC transporter, permease component (from data) + strong
HSERO_RS03650 HSERO_RS03650 Mannose isomerase (EC 5.3.1.7) (from data) + strong
HSERO_RS03655 HSERO_RS03655 ABC transporter substrate-binding protein - insig.
HSERO_RS03660 HSERO_RS03660 diguanylate cyclase - insig.
HSERO_RS03665 HSERO_RS03665 oxidoreductase - insig.
HSERO_RS03670 HSERO_RS03670 hypothetical protein - sig.
HSERO_RS03675 HSERO_RS03675 type VI secretion protein - cofit

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