Gene info for HSERO_RS03645 in Herbaspirillum seropedicae SmR1

Updated annotation (from data): D-mannose ABC transporter, permease component
Rationale: Specific phenotype on D-mannose
Original annotation: ribose ABC transporter permease
Type 1: Protein-coding gene
Located on scaffold NC_014323, + strand, nucleotides 796,117 to 797,136
See nucleotide sequence around HSERO_RS03645 or for all of scaffold NC_014323

Other databases: NCBI, uniprot: D8IZC8

Nearby Genes

500 ntHSERO_RS03620 and HSERO_RS03625 are separated by 94 nucleotidesHSERO_RS03625 and HSERO_RS03630 are separated by 381 nucleotidesHSERO_RS03630 and HSERO_RS03635 are separated by 62 nucleotidesHSERO_RS03635 and HSERO_RS03640 are separated by 97 nucleotidesHSERO_RS03640 and HSERO_RS03645 are separated by 79 nucleotidesHSERO_RS03645 and HSERO_RS03650 are separated by 21 nucleotidesHSERO_RS03650 and HSERO_RS03655 are separated by 43 nucleotidesHSERO_RS03655 and HSERO_RS03660 are separated by 30 nucleotidesHSERO_RS03660 and HSERO_RS03665 are separated by 4 nucleotidesHSERO_RS03665 and HSERO_RS03670 are separated by 355 nucleotides HSERO_RS03620: HSERO_RS03620 - LysR family transcriptional regulator, at 790,802 to 791,719 _RS03620 HSERO_RS03625: HSERO_RS03625 - nicotinamidase-like protein, at 791,814 to 792,422 _RS03625 HSERO_RS03630: HSERO_RS03630 - fructose transporter, at 792,804 to 793,421 _RS03630 HSERO_RS03635: HSERO_RS03635 - D-mannose ABC transporter, substrate-binding component (from data), at 793,484 to 794,434 _RS03635 HSERO_RS03640: HSERO_RS03640 - D-mannose ABC transporter, ATPase component (from data), at 794,532 to 796,037 _RS03640 HSERO_RS03645: HSERO_RS03645 - D-mannose ABC transporter, permease component (from data), at 796,117 to 797,136 _RS03645 HSERO_RS03650: HSERO_RS03650 - Mannose isomerase (EC 5.3.1.7) (from data), at 797,158 to 798,348 _RS03650 HSERO_RS03655: HSERO_RS03655 - ABC transporter substrate-binding protein, at 798,392 to 799,237 _RS03655 HSERO_RS03660: HSERO_RS03660 - diguanylate cyclase, at 799,268 to 800,668 _RS03660 HSERO_RS03665: HSERO_RS03665 - oxidoreductase, at 800,673 to 802,172 _RS03665 HSERO_RS03670: HSERO_RS03670 - hypothetical protein, at 802,528 to 802,962 _RS03670
Locus Name Description Strand Phenotype
HSERO_RS03620 HSERO_RS03620 LysR family transcriptional regulator - sig.
HSERO_RS03625 HSERO_RS03625 nicotinamidase-like protein + sig.
HSERO_RS03630 HSERO_RS03630 fructose transporter + strong
HSERO_RS03635 HSERO_RS03635 D-mannose ABC transporter, substrate-binding component (from data) + insig.
HSERO_RS03640 HSERO_RS03640 D-mannose ABC transporter, ATPase component (from data) + strong
HSERO_RS03645 HSERO_RS03645 D-mannose ABC transporter, permease component (from data) + strong
HSERO_RS03650 HSERO_RS03650 Mannose isomerase (EC 5.3.1.7) (from data) + strong
HSERO_RS03655 HSERO_RS03655 ABC transporter substrate-binding protein - insig.
HSERO_RS03660 HSERO_RS03660 diguanylate cyclase - insig.
HSERO_RS03665 HSERO_RS03665 oxidoreductase - insig.
HSERO_RS03670 HSERO_RS03670 hypothetical protein - sig.

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