Gene info for HMPREF1078_RS20055 in Parabacteroides merdae CL09T00C40

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 828,011 to 828,142
See nucleotide sequence around HMPREF1078_RS20055 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS03485 and HMPREF1078_RS03490 are separated by 139 nucleotidesHMPREF1078_RS03490 and HMPREF1078_RS03495 are separated by 170 nucleotidesHMPREF1078_RS03495 and HMPREF1078_RS03500 are separated by 112 nucleotidesHMPREF1078_RS03500 and HMPREF1078_RS03510 are separated by 89 nucleotidesHMPREF1078_RS03510 and HMPREF1078_RS20055 are separated by 4 nucleotidesHMPREF1078_RS20055 and HMPREF1078_RS03515 are separated by 54 nucleotidesHMPREF1078_RS03515 and HMPREF1078_RS03520 are separated by 17 nucleotidesHMPREF1078_RS03520 and HMPREF1078_RS03525 are separated by 154 nucleotidesHMPREF1078_RS03525 and HMPREF1078_RS19500 are separated by 7 nucleotidesHMPREF1078_RS19500 and HMPREF1078_RS19295 overlap by 38 nucleotides HMPREF1078_RS03485: HMPREF1078_RS03485 - phosphomethylpyrimidine synthase ThiC, at 822,218 to 823,924 _RS03485 HMPREF1078_RS03490: HMPREF1078_RS03490 - response regulator transcription factor, at 824,064 to 824,963 _RS03490 HMPREF1078_RS03495: HMPREF1078_RS03495 - hypothetical protein, at 825,134 to 825,637 _RS03495 HMPREF1078_RS03500: HMPREF1078_RS03500 - carboxymuconolactone decarboxylase family protein, at 825,750 to 827,425 _RS03500 HMPREF1078_RS03510: HMPREF1078_RS03510 - cupin domain-containing protein, at 827,515 to 828,006 _RS03510 HMPREF1078_RS20055: HMPREF1078_RS20055 - hypothetical protein, at 828,011 to 828,142 _RS20055 HMPREF1078_RS03515: HMPREF1078_RS03515 - response regulator transcription factor, at 828,197 to 829,027 _RS03515 HMPREF1078_RS03520: HMPREF1078_RS03520 - AraC family transcriptional regulator, at 829,045 to 829,941 _RS03520 HMPREF1078_RS03525: HMPREF1078_RS03525 - antibiotic biosynthesis monooxygenase, at 830,096 to 830,590 _RS03525 HMPREF1078_RS19500: HMPREF1078_RS19500 - hypothetical protein, at 830,598 to 831,154 _RS19500 HMPREF1078_RS19295: HMPREF1078_RS19295 - hypothetical protein, at 831,117 to 831,266 _RS19295
Locus Name Description Strand Phenotype
HMPREF1078_RS03485 HMPREF1078_RS03485 phosphomethylpyrimidine synthase ThiC + strong
HMPREF1078_RS03490 HMPREF1078_RS03490 response regulator transcription factor - insig.
HMPREF1078_RS03495 HMPREF1078_RS03495 hypothetical protein + insig.
HMPREF1078_RS03500 HMPREF1078_RS03500 carboxymuconolactone decarboxylase family protein + insig.
HMPREF1078_RS03510 HMPREF1078_RS03510 cupin domain-containing protein + insig.
HMPREF1078_RS20055 HMPREF1078_RS20055 hypothetical protein + insig.
HMPREF1078_RS03515 HMPREF1078_RS03515 response regulator transcription factor - insig.
HMPREF1078_RS03520 HMPREF1078_RS03520 AraC family transcriptional regulator - insig.
HMPREF1078_RS03525 HMPREF1078_RS03525 antibiotic biosynthesis monooxygenase + insig.
HMPREF1078_RS19500 HMPREF1078_RS19500 hypothetical protein + sig.
HMPREF1078_RS19295 HMPREF1078_RS19295 hypothetical protein + no data

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