Gene info for HMPREF1078_RS20010 in Parabacteroides merdae CL09T00C40

Annotation: AraC family ligand binding domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976532, + strand, nucleotides 28,906 to 29,457
See nucleotide sequence around HMPREF1078_RS20010 or for all of scaffold NZ_JH976532

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS17920 and HMPREF1078_RS17925 overlap by 4 nucleotidesHMPREF1078_RS17925 and HMPREF1078_RS17930 are separated by 200 nucleotidesHMPREF1078_RS17930 and HMPREF1078_RS17935 are separated by 23 nucleotidesHMPREF1078_RS17935 and HMPREF1078_RS17940 are separated by 405 nucleotidesHMPREF1078_RS17940 and HMPREF1078_RS20010 are separated by 95 nucleotidesHMPREF1078_RS20010 and HMPREF1078_RS20015 overlap by 4 nucleotidesHMPREF1078_RS20015 and HMPREF1078_RS17950 are separated by 136 nucleotidesHMPREF1078_RS17950 and HMPREF1078_RS20020 are separated by 235 nucleotidesHMPREF1078_RS20020 and HMPREF1078_RS20025 are separated by 79 nucleotidesHMPREF1078_RS20025 and HMPREF1078_RS20030 are separated by 131 nucleotides HMPREF1078_RS17920: HMPREF1078_RS17920 - DUF6057 family protein, at 19,649 to 21,028 _RS17920 HMPREF1078_RS17925: HMPREF1078_RS17925 - DUF6057 family protein, at 21,025 to 21,492 _RS17925 HMPREF1078_RS17930: HMPREF1078_RS17930 - RagB/SusD family nutrient uptake outer membrane protein, at 21,693 to 23,657 _RS17930 HMPREF1078_RS17935: HMPREF1078_RS17935 - TonB-dependent receptor, at 23,681 to 26,860 _RS17935 HMPREF1078_RS17940: HMPREF1078_RS17940 - ADP-ribosylglycohydrolase family protein, at 27,266 to 28,810 _RS17940 HMPREF1078_RS20010: HMPREF1078_RS20010 - AraC family ligand binding domain-containing protein, at 28,906 to 29,457 _RS20010 HMPREF1078_RS20015: HMPREF1078_RS20015 - helix-turn-helix transcriptional regulator, at 29,454 to 29,867 _RS20015 HMPREF1078_RS17950: HMPREF1078_RS17950 - GDSL-type esterase/lipase family protein, at 30,004 to 30,888 _RS17950 HMPREF1078_RS20020: HMPREF1078_RS20020 - hypothetical protein, at 31,124 to 31,243 _RS20020 HMPREF1078_RS20025: HMPREF1078_RS20025 - hypothetical protein, at 31,323 to 31,505 _RS20025 HMPREF1078_RS20030: HMPREF1078_RS20030 - type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein, at 31,637 to 31,903 _RS20030
Locus Name Description Strand Phenotype
HMPREF1078_RS17920 HMPREF1078_RS17920 DUF6057 family protein - insig.
HMPREF1078_RS17925 HMPREF1078_RS17925 DUF6057 family protein - insig.
HMPREF1078_RS17930 HMPREF1078_RS17930 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS17935 HMPREF1078_RS17935 TonB-dependent receptor - insig.
HMPREF1078_RS17940 HMPREF1078_RS17940 ADP-ribosylglycohydrolase family protein + insig.
HMPREF1078_RS20010 HMPREF1078_RS20010 AraC family ligand binding domain-containing protein + insig.
HMPREF1078_RS20015 HMPREF1078_RS20015 helix-turn-helix transcriptional regulator + insig.
HMPREF1078_RS17950 HMPREF1078_RS17950 GDSL-type esterase/lipase family protein - insig.
HMPREF1078_RS20020 HMPREF1078_RS20020 hypothetical protein - insig.
HMPREF1078_RS20025 HMPREF1078_RS20025 hypothetical protein - no data
HMPREF1078_RS20030 HMPREF1078_RS20030 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein - insig.

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