Gene info for HMPREF1078_RS19785 in Parabacteroides merdae CL09T00C40

Annotation: DUF5989 family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 376,144 to 376,293
See nucleotide sequence around HMPREF1078_RS19785 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS05425 and HMPREF1078_RS05430 are separated by 15 nucleotidesHMPREF1078_RS05430 and HMPREF1078_RS05435 are separated by 19 nucleotidesHMPREF1078_RS05435 and HMPREF1078_RS05440 are separated by 91 nucleotidesHMPREF1078_RS05440 and HMPREF1078_RS05445 are separated by 7 nucleotidesHMPREF1078_RS05445 and HMPREF1078_RS19785 are separated by 3 nucleotidesHMPREF1078_RS19785 and HMPREF1078_RS05450 are separated by 7 nucleotidesHMPREF1078_RS05450 and HMPREF1078_RS05455 are separated by 2 nucleotidesHMPREF1078_RS05455 and HMPREF1078_RS05460 overlap by 4 nucleotidesHMPREF1078_RS05460 and HMPREF1078_RS05465 are separated by 209 nucleotidesHMPREF1078_RS05465 and HMPREF1078_RS05470 are separated by 9 nucleotides HMPREF1078_RS05425: HMPREF1078_RS05425 - TonB-dependent receptor, at 366,784 to 369,954 _RS05425 HMPREF1078_RS05430: HMPREF1078_RS05430 - RagB/SusD family nutrient uptake outer membrane protein, at 369,970 to 371,727 _RS05430 HMPREF1078_RS05435: HMPREF1078_RS05435 - DUF3823 domain-containing protein, at 371,747 to 372,418 _RS05435 HMPREF1078_RS05440: HMPREF1078_RS05440 - SGNH/GDSL hydrolase family protein, at 372,510 to 374,309 _RS05440 HMPREF1078_RS05445: HMPREF1078_RS05445 - carbamoyltransferase, at 374,317 to 376,140 _RS05445 HMPREF1078_RS19785: HMPREF1078_RS19785 - DUF5989 family protein, at 376,144 to 376,293 _RS19785 HMPREF1078_RS05450: HMPREF1078_RS05450 - hypothetical protein, at 376,301 to 376,528 _RS05450 HMPREF1078_RS05455: HMPREF1078_RS05455 - DUF6057 family protein, at 376,531 to 378,252 _RS05455 HMPREF1078_RS05460: HMPREF1078_RS05460 - PD40 domain-containing protein, at 378,249 to 379,775 _RS05460 HMPREF1078_RS05465: HMPREF1078_RS05465 - efflux RND transporter periplasmic adaptor subunit, at 379,985 to 381,082 _RS05465 HMPREF1078_RS05470: HMPREF1078_RS05470 - efflux RND transporter permease subunit, at 381,092 to 384,148 _RS05470
Locus Name Description Strand Phenotype
HMPREF1078_RS05425 HMPREF1078_RS05425 TonB-dependent receptor + cofit
HMPREF1078_RS05430 HMPREF1078_RS05430 RagB/SusD family nutrient uptake outer membrane protein + cofit
HMPREF1078_RS05435 HMPREF1078_RS05435 DUF3823 domain-containing protein + cofit
HMPREF1078_RS05440 HMPREF1078_RS05440 SGNH/GDSL hydrolase family protein + insig.
HMPREF1078_RS05445 HMPREF1078_RS05445 carbamoyltransferase + insig.
HMPREF1078_RS19785 HMPREF1078_RS19785 DUF5989 family protein + insig.
HMPREF1078_RS05450 HMPREF1078_RS05450 hypothetical protein + sig.
HMPREF1078_RS05455 HMPREF1078_RS05455 DUF6057 family protein + insig.
HMPREF1078_RS05460 HMPREF1078_RS05460 PD40 domain-containing protein + insig.
HMPREF1078_RS05465 HMPREF1078_RS05465 efflux RND transporter periplasmic adaptor subunit + insig.
HMPREF1078_RS05470 HMPREF1078_RS05470 efflux RND transporter permease subunit + insig.

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