Gene info for HMPREF1078_RS19675 in Parabacteroides merdae CL09T00C40

Annotation: cAMP-binding protein
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 185,409 to 185,555
See nucleotide sequence around HMPREF1078_RS19675 or for all of scaffold NZ_JH976524

Nearby Genes

500 ntHMPREF1078_RS00760 and HMPREF1078_RS00765 are separated by 30 nucleotidesHMPREF1078_RS00765 and HMPREF1078_RS00770 overlap by 8 nucleotidesHMPREF1078_RS00770 and HMPREF1078_RS00775 are separated by 78 nucleotidesHMPREF1078_RS00775 and HMPREF1078_RS00780 are separated by 154 nucleotidesHMPREF1078_RS00780 and HMPREF1078_RS19675 are separated by 0 nucleotidesHMPREF1078_RS19675 and HMPREF1078_RS00785 are separated by 411 nucleotidesHMPREF1078_RS00785 and HMPREF1078_RS00790 are separated by 83 nucleotidesHMPREF1078_RS00790 and HMPREF1078_RS00795 are separated by 214 nucleotidesHMPREF1078_RS00795 and HMPREF1078_RS00800 are separated by 762 nucleotidesHMPREF1078_RS00800 and HMPREF1078_RS00805 are separated by 150 nucleotides HMPREF1078_RS00760: HMPREF1078_RS00760 - STN and carboxypeptidase regulatory-like domain-containing protein, at 180,361 to 181,920 _RS00760 HMPREF1078_RS00765: HMPREF1078_RS00765 - FecR domain-containing protein, at 181,951 to 182,799 _RS00765 HMPREF1078_RS00770: HMPREF1078_RS00770 - RNA polymerase sigma-70 factor, at 182,792 to 183,343 _RS00770 HMPREF1078_RS00775: HMPREF1078_RS00775 - carboxypeptidase-like regulatory domain-containing protein, at 183,422 to 184,690 _RS00775 HMPREF1078_RS00780: HMPREF1078_RS00780 - RNA polymerase sigma-70 factor, at 184,845 to 185,408 _RS00780 HMPREF1078_RS19675: HMPREF1078_RS19675 - cAMP-binding protein, at 185,409 to 185,555 _RS19675 HMPREF1078_RS00785: HMPREF1078_RS00785 - hypothetical protein, at 185,967 to 187,337 _RS00785 HMPREF1078_RS00790: HMPREF1078_RS00790 - outer membrane protein transport protein, at 187,421 to 189,094 _RS00790 HMPREF1078_RS00795: HMPREF1078_RS00795 - sigma-70 family RNA polymerase sigma factor, at 189,309 to 189,902 _RS00795 HMPREF1078_RS00800: HMPREF1078_RS00800 - ribulose-phosphate 3-epimerase, at 190,665 to 191,315 _RS00800 HMPREF1078_RS00805: HMPREF1078_RS00805 - ComEC/Rec2 family competence protein, at 191,466 to 192,746 _RS00805
Locus Name Description Strand Phenotype
HMPREF1078_RS00760 HMPREF1078_RS00760 STN and carboxypeptidase regulatory-like domain-containing protein - insig.
HMPREF1078_RS00765 HMPREF1078_RS00765 FecR domain-containing protein - strong
HMPREF1078_RS00770 HMPREF1078_RS00770 RNA polymerase sigma-70 factor - insig.
HMPREF1078_RS00775 HMPREF1078_RS00775 carboxypeptidase-like regulatory domain-containing protein - insig.
HMPREF1078_RS00780 HMPREF1078_RS00780 RNA polymerase sigma-70 factor + insig.
HMPREF1078_RS19675 HMPREF1078_RS19675 cAMP-binding protein + insig.
HMPREF1078_RS00785 HMPREF1078_RS00785 hypothetical protein + strong
HMPREF1078_RS00790 HMPREF1078_RS00790 outer membrane protein transport protein + strong
HMPREF1078_RS00795 HMPREF1078_RS00795 sigma-70 family RNA polymerase sigma factor + strong
HMPREF1078_RS00800 HMPREF1078_RS00800 ribulose-phosphate 3-epimerase + no data
HMPREF1078_RS00805 HMPREF1078_RS00805 ComEC/Rec2 family competence protein + insig.

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