Gene info for HMPREF1078_RS18155 in Parabacteroides merdae CL09T00C40

Annotation: S1-like domain-containing RNA-binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976533, + strand, nucleotides 13,397 to 14,236
See nucleotide sequence around HMPREF1078_RS18155 or for all of scaffold NZ_JH976533

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS18130 and HMPREF1078_RS18135 are separated by 17 nucleotidesHMPREF1078_RS18135 and HMPREF1078_RS18140 are separated by 18 nucleotidesHMPREF1078_RS18140 and HMPREF1078_RS18145 are separated by 7 nucleotidesHMPREF1078_RS18145 and HMPREF1078_RS18150 are separated by 1 nucleotidesHMPREF1078_RS18150 and HMPREF1078_RS18155 are separated by 190 nucleotidesHMPREF1078_RS18155 and HMPREF1078_RS18160 are separated by 724 nucleotidesHMPREF1078_RS18160 and HMPREF1078_RS18165 are separated by 99 nucleotidesHMPREF1078_RS18165 and HMPREF1078_RS18170 are separated by 149 nucleotidesHMPREF1078_RS18170 and HMPREF1078_RS18175 are separated by 10 nucleotidesHMPREF1078_RS18175 and HMPREF1078_RS18180 are separated by 155 nucleotides HMPREF1078_RS18130: HMPREF1078_RS18130 - oligosaccharide flippase family protein, at 6,750 to 8,009 _RS18130 HMPREF1078_RS18135: HMPREF1078_RS18135 - ornithine cyclodeaminase, at 8,027 to 8,965 _RS18135 HMPREF1078_RS18140: HMPREF1078_RS18140 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 8,984 to 10,792 _RS18140 HMPREF1078_RS18145: HMPREF1078_RS18145 - Wzz/FepE/Etk N-terminal domain-containing protein, at 10,800 to 12,404 _RS18145 HMPREF1078_RS18150: HMPREF1078_RS18150 - polysaccharide biosynthesis/export family protein, at 12,406 to 13,206 _RS18150 HMPREF1078_RS18155: HMPREF1078_RS18155 - S1-like domain-containing RNA-binding protein, at 13,397 to 14,236 _RS18155 HMPREF1078_RS18160: HMPREF1078_RS18160 - 5S ribosomal RNA, at 14,961 to 15,071 _RS18160 HMPREF1078_RS18165: HMPREF1078_RS18165 - 23S ribosomal RNA, at 15,171 to 18,046 _RS18165 HMPREF1078_RS18170: HMPREF1078_RS18170 - tRNA-Ala, at 18,196 to 18,269 _RS18170 HMPREF1078_RS18175: HMPREF1078_RS18175 - tRNA-Ile, at 18,280 to 18,356 _RS18175 HMPREF1078_RS18180: HMPREF1078_RS18180 - 16S ribosomal RNA, at 18,512 to 20,042 _RS18180
Locus Name Description Strand Phenotype
HMPREF1078_RS18130 HMPREF1078_RS18130 oligosaccharide flippase family protein - strong
HMPREF1078_RS18135 HMPREF1078_RS18135 ornithine cyclodeaminase - strong
HMPREF1078_RS18140 HMPREF1078_RS18140 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme - strong
HMPREF1078_RS18145 HMPREF1078_RS18145 Wzz/FepE/Etk N-terminal domain-containing protein - strong
HMPREF1078_RS18150 HMPREF1078_RS18150 polysaccharide biosynthesis/export family protein - strong
HMPREF1078_RS18155 HMPREF1078_RS18155 S1-like domain-containing RNA-binding protein + strong
HMPREF1078_RS18160 HMPREF1078_RS18160 5S ribosomal RNA - no data
HMPREF1078_RS18165 HMPREF1078_RS18165 23S ribosomal RNA - no data
HMPREF1078_RS18170 HMPREF1078_RS18170 tRNA-Ala - no data
HMPREF1078_RS18175 HMPREF1078_RS18175 tRNA-Ile - no data
HMPREF1078_RS18180 HMPREF1078_RS18180 16S ribosomal RNA - no data

Or browse nearby genes

Or see the comparative fitness browser