Gene info for HMPREF1078_RS18145 in Parabacteroides merdae CL09T00C40

Annotation: Wzz/FepE/Etk N-terminal domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976533, - strand, nucleotides 10,800 to 12,404
See nucleotide sequence around HMPREF1078_RS18145 or for all of scaffold NZ_JH976533

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS18120 and HMPREF1078_RS18125 are separated by 11 nucleotidesHMPREF1078_RS18125 and HMPREF1078_RS18130 overlap by 14 nucleotidesHMPREF1078_RS18130 and HMPREF1078_RS18135 are separated by 17 nucleotidesHMPREF1078_RS18135 and HMPREF1078_RS18140 are separated by 18 nucleotidesHMPREF1078_RS18140 and HMPREF1078_RS18145 are separated by 7 nucleotidesHMPREF1078_RS18145 and HMPREF1078_RS18150 are separated by 1 nucleotidesHMPREF1078_RS18150 and HMPREF1078_RS18155 are separated by 190 nucleotidesHMPREF1078_RS18155 and HMPREF1078_RS18160 are separated by 724 nucleotidesHMPREF1078_RS18160 and HMPREF1078_RS18165 are separated by 99 nucleotidesHMPREF1078_RS18165 and HMPREF1078_RS18170 are separated by 149 nucleotides HMPREF1078_RS18120: HMPREF1078_RS18120 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 4,794 to 5,960 _RS18120 HMPREF1078_RS18125: HMPREF1078_RS18125 - LicD family protein, at 5,972 to 6,763 _RS18125 HMPREF1078_RS18130: HMPREF1078_RS18130 - oligosaccharide flippase family protein, at 6,750 to 8,009 _RS18130 HMPREF1078_RS18135: HMPREF1078_RS18135 - ornithine cyclodeaminase, at 8,027 to 8,965 _RS18135 HMPREF1078_RS18140: HMPREF1078_RS18140 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 8,984 to 10,792 _RS18140 HMPREF1078_RS18145: HMPREF1078_RS18145 - Wzz/FepE/Etk N-terminal domain-containing protein, at 10,800 to 12,404 _RS18145 HMPREF1078_RS18150: HMPREF1078_RS18150 - polysaccharide biosynthesis/export family protein, at 12,406 to 13,206 _RS18150 HMPREF1078_RS18155: HMPREF1078_RS18155 - S1-like domain-containing RNA-binding protein, at 13,397 to 14,236 _RS18155 HMPREF1078_RS18160: HMPREF1078_RS18160 - 5S ribosomal RNA, at 14,961 to 15,071 _RS18160 HMPREF1078_RS18165: HMPREF1078_RS18165 - 23S ribosomal RNA, at 15,171 to 18,046 _RS18165 HMPREF1078_RS18170: HMPREF1078_RS18170 - tRNA-Ala, at 18,196 to 18,269 _RS18170
Locus Name Description Strand Phenotype
HMPREF1078_RS18120 HMPREF1078_RS18120 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) - strong
HMPREF1078_RS18125 HMPREF1078_RS18125 LicD family protein - strong
HMPREF1078_RS18130 HMPREF1078_RS18130 oligosaccharide flippase family protein - strong
HMPREF1078_RS18135 HMPREF1078_RS18135 ornithine cyclodeaminase - strong
HMPREF1078_RS18140 HMPREF1078_RS18140 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme - strong
HMPREF1078_RS18145 HMPREF1078_RS18145 Wzz/FepE/Etk N-terminal domain-containing protein - strong
HMPREF1078_RS18150 HMPREF1078_RS18150 polysaccharide biosynthesis/export family protein - strong
HMPREF1078_RS18155 HMPREF1078_RS18155 S1-like domain-containing RNA-binding protein + strong
HMPREF1078_RS18160 HMPREF1078_RS18160 5S ribosomal RNA - no data
HMPREF1078_RS18165 HMPREF1078_RS18165 23S ribosomal RNA - no data
HMPREF1078_RS18170 HMPREF1078_RS18170 tRNA-Ala - no data

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