Gene info for HMPREF1078_RS18110 in Parabacteroides merdae CL09T00C40

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976533, - strand, nucleotides 2,947 to 3,591
See nucleotide sequence around HMPREF1078_RS18110 or for all of scaffold NZ_JH976533

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS18090 and HMPREF1078_RS18095 are separated by 77 nucleotidesHMPREF1078_RS18095 and HMPREF1078_RS18100 are separated by 75 nucleotidesHMPREF1078_RS18100 and HMPREF1078_RS18105 overlap by 17 nucleotidesHMPREF1078_RS18105 and HMPREF1078_RS18110 are separated by 56 nucleotidesHMPREF1078_RS18110 and HMPREF1078_RS18115 are separated by 11 nucleotidesHMPREF1078_RS18115 and HMPREF1078_RS18120 are separated by 9 nucleotidesHMPREF1078_RS18120 and HMPREF1078_RS18125 are separated by 11 nucleotidesHMPREF1078_RS18125 and HMPREF1078_RS18130 overlap by 14 nucleotidesHMPREF1078_RS18130 and HMPREF1078_RS18135 are separated by 17 nucleotides HMPREF1078_RS18090: HMPREF1078_RS18090 - IS256 family transposase, at 1 to 415 _RS18090 HMPREF1078_RS18095: HMPREF1078_RS18095 - IS66-like element ISBvu3 family transposase, at 493 to 2,106 _RS18095 HMPREF1078_RS18100: HMPREF1078_RS18100 - IS66 family insertion sequence element accessory protein TnpB, at 2,182 to 2,550 _RS18100 HMPREF1078_RS18105: HMPREF1078_RS18105 - hypothetical protein, at 2,534 to 2,890 _RS18105 HMPREF1078_RS18110: HMPREF1078_RS18110 - hypothetical protein, at 2,947 to 3,591 _RS18110 HMPREF1078_RS18115: HMPREF1078_RS18115 - glycosyltransferase family 4 protein, at 3,603 to 4,784 _RS18115 HMPREF1078_RS18120: HMPREF1078_RS18120 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 4,794 to 5,960 _RS18120 HMPREF1078_RS18125: HMPREF1078_RS18125 - LicD family protein, at 5,972 to 6,763 _RS18125 HMPREF1078_RS18130: HMPREF1078_RS18130 - oligosaccharide flippase family protein, at 6,750 to 8,009 _RS18130 HMPREF1078_RS18135: HMPREF1078_RS18135 - ornithine cyclodeaminase, at 8,027 to 8,965 _RS18135
Locus Name Description Strand Phenotype
HMPREF1078_RS18090 HMPREF1078_RS18090 IS256 family transposase + no data
HMPREF1078_RS18095 HMPREF1078_RS18095 IS66-like element ISBvu3 family transposase - no data
HMPREF1078_RS18100 HMPREF1078_RS18100 IS66 family insertion sequence element accessory protein TnpB - no data
HMPREF1078_RS18105 HMPREF1078_RS18105 hypothetical protein - no data
HMPREF1078_RS18110 HMPREF1078_RS18110 hypothetical protein - strong
HMPREF1078_RS18115 HMPREF1078_RS18115 glycosyltransferase family 4 protein - strong
HMPREF1078_RS18120 HMPREF1078_RS18120 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) - strong
HMPREF1078_RS18125 HMPREF1078_RS18125 LicD family protein - strong
HMPREF1078_RS18130 HMPREF1078_RS18130 oligosaccharide flippase family protein - strong
HMPREF1078_RS18135 HMPREF1078_RS18135 ornithine cyclodeaminase - strong

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