Gene info for HMPREF1078_RS18095 in Parabacteroides merdae CL09T00C40

Annotation: IS66-like element ISBvu3 family transposase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976533, - strand, nucleotides 493 to 2,106
See nucleotide sequence around HMPREF1078_RS18095 or for all of scaffold NZ_JH976533

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS18090 and HMPREF1078_RS18095 are separated by 77 nucleotidesHMPREF1078_RS18095 and HMPREF1078_RS18100 are separated by 75 nucleotidesHMPREF1078_RS18100 and HMPREF1078_RS18105 overlap by 17 nucleotidesHMPREF1078_RS18105 and HMPREF1078_RS18110 are separated by 56 nucleotidesHMPREF1078_RS18110 and HMPREF1078_RS18115 are separated by 11 nucleotidesHMPREF1078_RS18115 and HMPREF1078_RS18120 are separated by 9 nucleotides HMPREF1078_RS18090: HMPREF1078_RS18090 - IS256 family transposase, at 1 to 415 _RS18090 HMPREF1078_RS18095: HMPREF1078_RS18095 - IS66-like element ISBvu3 family transposase, at 493 to 2,106 _RS18095 HMPREF1078_RS18100: HMPREF1078_RS18100 - IS66 family insertion sequence element accessory protein TnpB, at 2,182 to 2,550 _RS18100 HMPREF1078_RS18105: HMPREF1078_RS18105 - hypothetical protein, at 2,534 to 2,890 _RS18105 HMPREF1078_RS18110: HMPREF1078_RS18110 - hypothetical protein, at 2,947 to 3,591 _RS18110 HMPREF1078_RS18115: HMPREF1078_RS18115 - glycosyltransferase family 4 protein, at 3,603 to 4,784 _RS18115 HMPREF1078_RS18120: HMPREF1078_RS18120 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 4,794 to 5,960 _RS18120
Locus Name Description Strand Phenotype
HMPREF1078_RS18090 HMPREF1078_RS18090 IS256 family transposase + no data
HMPREF1078_RS18095 HMPREF1078_RS18095 IS66-like element ISBvu3 family transposase - no data
HMPREF1078_RS18100 HMPREF1078_RS18100 IS66 family insertion sequence element accessory protein TnpB - no data
HMPREF1078_RS18105 HMPREF1078_RS18105 hypothetical protein - no data
HMPREF1078_RS18110 HMPREF1078_RS18110 hypothetical protein - strong
HMPREF1078_RS18115 HMPREF1078_RS18115 glycosyltransferase family 4 protein - strong
HMPREF1078_RS18120 HMPREF1078_RS18120 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) - strong

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