Gene info for HMPREF1078_RS18005 in Parabacteroides merdae CL09T00C40

Annotation: reverse transcriptase/maturase family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976532, - strand, nucleotides 39,433 to 41,250
See nucleotide sequence around HMPREF1078_RS18005 or for all of scaffold NZ_JH976532

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS17980 and HMPREF1078_RS17985 are separated by 8 nucleotidesHMPREF1078_RS17985 and HMPREF1078_RS17990 are separated by 628 nucleotidesHMPREF1078_RS17990 and HMPREF1078_RS17995 are separated by 18 nucleotidesHMPREF1078_RS17995 and HMPREF1078_RS20035 are separated by 22 nucleotidesHMPREF1078_RS20035 and HMPREF1078_RS18005 are separated by 115 nucleotidesHMPREF1078_RS18005 and HMPREF1078_RS18010 are separated by 565 nucleotidesHMPREF1078_RS18010 and HMPREF1078_RS18020 are separated by 662 nucleotidesHMPREF1078_RS18020 and HMPREF1078_RS18025 are separated by 29 nucleotidesHMPREF1078_RS18025 and HMPREF1078_RS18030 are separated by 62 nucleotidesHMPREF1078_RS18030 and HMPREF1078_RS18035 are separated by 199 nucleotides HMPREF1078_RS17980: HMPREF1078_RS17980 - RloB family protein, at 32,879 to 33,421 _RS17980 HMPREF1078_RS17985: HMPREF1078_RS17985 - ATP-binding protein, at 33,430 to 34,674 _RS17985 HMPREF1078_RS17990: HMPREF1078_RS17990 - family 20 glycosylhydrolase, at 35,303 to 37,615 _RS17990 HMPREF1078_RS17995: HMPREF1078_RS17995 - DUF4838 domain-containing protein, at 37,634 to 39,070 _RS17995 HMPREF1078_RS20035: HMPREF1078_RS20035 - tyrosine-type recombinase/integrase, at 39,093 to 39,317 _RS20035 HMPREF1078_RS18005: HMPREF1078_RS18005 - reverse transcriptase/maturase family protein, at 39,433 to 41,250 _RS18005 HMPREF1078_RS18010: HMPREF1078_RS18010 - site-specific integrase, at 41,816 to 42,826 _RS18010 HMPREF1078_RS18020: HMPREF1078_RS18020 - phage integrase SAM-like domain-containing protein, at 43,489 to 44,910 _RS18020 HMPREF1078_RS18025: HMPREF1078_RS18025 - hypothetical protein, at 44,940 to 45,824 _RS18025 HMPREF1078_RS18030: HMPREF1078_RS18030 - helix-turn-helix domain-containing protein, at 45,887 to 46,174 _RS18030 HMPREF1078_RS18035: HMPREF1078_RS18035 - hypothetical protein, at 46,374 to 47,087 _RS18035
Locus Name Description Strand Phenotype
HMPREF1078_RS17980 HMPREF1078_RS17980 RloB family protein - insig.
HMPREF1078_RS17985 HMPREF1078_RS17985 ATP-binding protein - insig.
HMPREF1078_RS17990 HMPREF1078_RS17990 family 20 glycosylhydrolase - insig.
HMPREF1078_RS17995 HMPREF1078_RS17995 DUF4838 domain-containing protein - insig.
HMPREF1078_RS20035 HMPREF1078_RS20035 tyrosine-type recombinase/integrase - insig.
HMPREF1078_RS18005 HMPREF1078_RS18005 reverse transcriptase/maturase family protein - insig.
HMPREF1078_RS18010 HMPREF1078_RS18010 site-specific integrase - insig.
HMPREF1078_RS18020 HMPREF1078_RS18020 phage integrase SAM-like domain-containing protein + no data
HMPREF1078_RS18025 HMPREF1078_RS18025 hypothetical protein + no data
HMPREF1078_RS18030 HMPREF1078_RS18030 helix-turn-helix domain-containing protein + no data
HMPREF1078_RS18035 HMPREF1078_RS18035 hypothetical protein + no data

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