Gene info for HMPREF1078_RS17990 in Parabacteroides merdae CL09T00C40

Annotation: family 20 glycosylhydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976532, - strand, nucleotides 35,303 to 37,615
See nucleotide sequence around HMPREF1078_RS17990 or for all of scaffold NZ_JH976532

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS20030 and HMPREF1078_RS17970 are separated by 245 nucleotidesHMPREF1078_RS17970 and HMPREF1078_RS17975 are separated by 138 nucleotidesHMPREF1078_RS17975 and HMPREF1078_RS17980 are separated by 88 nucleotidesHMPREF1078_RS17980 and HMPREF1078_RS17985 are separated by 8 nucleotidesHMPREF1078_RS17985 and HMPREF1078_RS17990 are separated by 628 nucleotidesHMPREF1078_RS17990 and HMPREF1078_RS17995 are separated by 18 nucleotidesHMPREF1078_RS17995 and HMPREF1078_RS20035 are separated by 22 nucleotidesHMPREF1078_RS20035 and HMPREF1078_RS18005 are separated by 115 nucleotidesHMPREF1078_RS18005 and HMPREF1078_RS18010 are separated by 565 nucleotidesHMPREF1078_RS18010 and HMPREF1078_RS18020 are separated by 662 nucleotides HMPREF1078_RS20030: HMPREF1078_RS20030 - type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein, at 31,637 to 31,903 _RS20030 HMPREF1078_RS17970: HMPREF1078_RS17970 - hypothetical protein, at 32,149 to 32,376 _RS17970 HMPREF1078_RS17975: HMPREF1078_RS17975 - hypothetical protein, at 32,515 to 32,790 _RS17975 HMPREF1078_RS17980: HMPREF1078_RS17980 - RloB family protein, at 32,879 to 33,421 _RS17980 HMPREF1078_RS17985: HMPREF1078_RS17985 - ATP-binding protein, at 33,430 to 34,674 _RS17985 HMPREF1078_RS17990: HMPREF1078_RS17990 - family 20 glycosylhydrolase, at 35,303 to 37,615 _RS17990 HMPREF1078_RS17995: HMPREF1078_RS17995 - DUF4838 domain-containing protein, at 37,634 to 39,070 _RS17995 HMPREF1078_RS20035: HMPREF1078_RS20035 - tyrosine-type recombinase/integrase, at 39,093 to 39,317 _RS20035 HMPREF1078_RS18005: HMPREF1078_RS18005 - reverse transcriptase/maturase family protein, at 39,433 to 41,250 _RS18005 HMPREF1078_RS18010: HMPREF1078_RS18010 - site-specific integrase, at 41,816 to 42,826 _RS18010 HMPREF1078_RS18020: HMPREF1078_RS18020 - phage integrase SAM-like domain-containing protein, at 43,489 to 44,910 _RS18020
Locus Name Description Strand Phenotype
HMPREF1078_RS20030 HMPREF1078_RS20030 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein - insig.
HMPREF1078_RS17970 HMPREF1078_RS17970 hypothetical protein + insig.
HMPREF1078_RS17975 HMPREF1078_RS17975 hypothetical protein - insig.
HMPREF1078_RS17980 HMPREF1078_RS17980 RloB family protein - insig.
HMPREF1078_RS17985 HMPREF1078_RS17985 ATP-binding protein - insig.
HMPREF1078_RS17990 HMPREF1078_RS17990 family 20 glycosylhydrolase - insig.
HMPREF1078_RS17995 HMPREF1078_RS17995 DUF4838 domain-containing protein - insig.
HMPREF1078_RS20035 HMPREF1078_RS20035 tyrosine-type recombinase/integrase - cofit
HMPREF1078_RS18005 HMPREF1078_RS18005 reverse transcriptase/maturase family protein - insig.
HMPREF1078_RS18010 HMPREF1078_RS18010 site-specific integrase - insig.
HMPREF1078_RS18020 HMPREF1078_RS18020 phage integrase SAM-like domain-containing protein + no data

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