Gene info for HMPREF1078_RS17930 in Parabacteroides merdae CL09T00C40

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976532, - strand, nucleotides 21,693 to 23,657
See nucleotide sequence around HMPREF1078_RS17930 or for all of scaffold NZ_JH976532

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS20005 and HMPREF1078_RS17905 are separated by 371 nucleotidesHMPREF1078_RS17905 and HMPREF1078_RS17915 are separated by 871 nucleotidesHMPREF1078_RS17915 and HMPREF1078_RS17920 are separated by 20 nucleotidesHMPREF1078_RS17920 and HMPREF1078_RS17925 overlap by 4 nucleotidesHMPREF1078_RS17925 and HMPREF1078_RS17930 are separated by 200 nucleotidesHMPREF1078_RS17930 and HMPREF1078_RS17935 are separated by 23 nucleotidesHMPREF1078_RS17935 and HMPREF1078_RS17940 are separated by 405 nucleotidesHMPREF1078_RS17940 and HMPREF1078_RS20010 are separated by 95 nucleotidesHMPREF1078_RS20010 and HMPREF1078_RS20015 overlap by 4 nucleotidesHMPREF1078_RS20015 and HMPREF1078_RS17950 are separated by 136 nucleotides HMPREF1078_RS20005: HMPREF1078_RS20005 - hypothetical protein, at 14,691 to 15,116 _RS20005 HMPREF1078_RS17905: HMPREF1078_RS17905 - PA14 domain-containing protein, at 15,488 to 17,308 _RS17905 HMPREF1078_RS17915: HMPREF1078_RS17915 - PD40 domain-containing protein, at 18,180 to 19,628 _RS17915 HMPREF1078_RS17920: HMPREF1078_RS17920 - DUF6057 family protein, at 19,649 to 21,028 _RS17920 HMPREF1078_RS17925: HMPREF1078_RS17925 - DUF6057 family protein, at 21,025 to 21,492 _RS17925 HMPREF1078_RS17930: HMPREF1078_RS17930 - RagB/SusD family nutrient uptake outer membrane protein, at 21,693 to 23,657 _RS17930 HMPREF1078_RS17935: HMPREF1078_RS17935 - TonB-dependent receptor, at 23,681 to 26,860 _RS17935 HMPREF1078_RS17940: HMPREF1078_RS17940 - ADP-ribosylglycohydrolase family protein, at 27,266 to 28,810 _RS17940 HMPREF1078_RS20010: HMPREF1078_RS20010 - AraC family ligand binding domain-containing protein, at 28,906 to 29,457 _RS20010 HMPREF1078_RS20015: HMPREF1078_RS20015 - helix-turn-helix transcriptional regulator, at 29,454 to 29,867 _RS20015 HMPREF1078_RS17950: HMPREF1078_RS17950 - GDSL-type esterase/lipase family protein, at 30,004 to 30,888 _RS17950
Locus Name Description Strand Phenotype
HMPREF1078_RS20005 HMPREF1078_RS20005 hypothetical protein + insig.
HMPREF1078_RS17905 HMPREF1078_RS17905 PA14 domain-containing protein - insig.
HMPREF1078_RS17915 HMPREF1078_RS17915 PD40 domain-containing protein - insig.
HMPREF1078_RS17920 HMPREF1078_RS17920 DUF6057 family protein - insig.
HMPREF1078_RS17925 HMPREF1078_RS17925 DUF6057 family protein - insig.
HMPREF1078_RS17930 HMPREF1078_RS17930 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS17935 HMPREF1078_RS17935 TonB-dependent receptor - insig.
HMPREF1078_RS17940 HMPREF1078_RS17940 ADP-ribosylglycohydrolase family protein + insig.
HMPREF1078_RS20010 HMPREF1078_RS20010 AraC family ligand binding domain-containing protein + insig.
HMPREF1078_RS20015 HMPREF1078_RS20015 helix-turn-helix transcriptional regulator + insig.
HMPREF1078_RS17950 HMPREF1078_RS17950 GDSL-type esterase/lipase family protein - insig.

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